RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 ASMTLO95671 621 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 KRT16P08779 473 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 CCNB1P14635 433 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 SSTR3P32745 418 aaPredicted RBP17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 SSR1P43307 286 aaKnown RBP17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 MCL1Q07820 350 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 EMC2Q15006 297 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 PWP2Q15269 919 aaKnown RBP17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 ABHD15Q6UXT9 468 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 ECHDC2Q86YB7 292 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 ALLCQ8N6M5 410 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 GLIS1Q8NBF1 620 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 N4BP2L2Q92802 583 aaPredicted RBP17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 SPATC1LQ9H0A9 340 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 KLHL11Q9NVR0 708 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 RBAKQ9NYW8 714 aaPredicted RBP17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 SLC9A2Q9UBY0 812 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 KCNG1Q9UIX4 513 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 DNPEPQ9ULA0 475 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 LCTP09848 1927 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 IBSPP21815 317 aaPredicted RBP17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 MMP8P22894 467 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 ZNF132P52740 706 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 SLC18A1P54219 525 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 ACTR2P61160 394 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 FKBP1BP68106 108 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 NOP14P78316 857 aaKnown RBP17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 LRRC38Q5VT99 294 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 RIOX2Q8IUF8 465 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 UBR7Q8N806 425 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 CHST13Q8NET6 341 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 DENND1AQ8TEH3 1009 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 AGAP11Q8TF27 550 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 STAMBPL1Q96FJ0 436 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 NUB1Q9Y5A7 615 aa17.31■□□□□ 0.36
CLCNKA-203ENST00000439316 TMEM191CA6NGB0 347 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 PI4K2BG5E9Z4 385 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 KRT1P04264 644 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 TMEM191BP0C7N4 346 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 KRT10P13645 584 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 TCF4P15884 667 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 PTPN7P35236 360 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 ADCY1Q08828 1119 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 ZNF252P-AS1Q0IIN9 211 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 MTERF2Q49AM1 385 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 ACCSLQ4AC99 568 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 ATP13A4Q4VNC1 1196 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 XKR3Q5GH77 459 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 MFSD7Q6UXD7 560 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 RGS9BPQ6ZS82 235 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 KIF2BQ8N4N8 673 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 C2orf69Q8N8R5 385 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 PITPNM3Q9BZ71 974 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 STARD13Q9Y3M8 1113 aa17.3■□□□□ 0.36
CLCNKA-203ENST00000439316 TCRBV5S1A1TA0A578 114 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 CNMDO75829 334 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 TJP3O95049 919 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 PECAM1P16284 738 aaPredicted RBP17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 OSBPP22059 807 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 RPL7AP62424 266 aaKnown RBP17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 MORF4L2Q15014 288 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 ZBTB41Q5SVQ8 909 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 SLFN12LQ6IEE8 588 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 NCAPG2Q86XI2 1143 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 ASAP3Q8TDY4 903 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 NSUN6Q8TEA1 469 aaKnown RBP17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 ZBTB45Q96K62 511 aaPredicted RBP17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 TXNRD2Q9NNW7 524 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 DRG1Q9Y295 367 aaKnown RBP17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 CNTNAP2Q9UHC6 1331 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 UNC5CO95185 931 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 LDHAP00338 332 aaKnown RBP17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 SUPT20HL2P0C7V6 817 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 ZSCAN5DPP0CG00 497 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 ARSEP51690 589 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 POLGP54098 1239 aaPredicted RBP17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 SP4Q02446 784 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 KAZNQ674X7 775 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 SPOCD1Q6ZMY3 1216 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 FAM47EQ6ZV65 393 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 CDHR1Q96JP9 859 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 TRABDQ9H4I3 376 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 SENP1Q9P0U3 644 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 RBPJLQ9UBG7 517 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 SMG5Q9UPR3 1016 aaKnown RBP17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 ZNF148Q9UQR1 794 aa17.29■□□□□ 0.36
CLCNKA-203ENST00000439316 ADGRA2Q96PE1 1338 aa17.28■□□□□ 0.36
CLCNKA-203ENST00000439316 A0A0B4J269 797 aa17.28■□□□□ 0.36
CLCNKA-203ENST00000439316 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
CLCNKA-203ENST00000439316 ATF7P17544 494 aaPredicted RBP17.28■□□□□ 0.36
CLCNKA-203ENST00000439316 GLRA2P23416 452 aa17.28■□□□□ 0.36
CLCNKA-203ENST00000439316 MSH2P43246 934 aa17.28■□□□□ 0.36
CLCNKA-203ENST00000439316 NAMPTP43490 491 aa17.28■□□□□ 0.36
CLCNKA-203ENST00000439316 VCPP55072 806 aaKnown RBP17.28■□□□□ 0.36
CLCNKA-203ENST00000439316 FASTKD3Q14CZ7 662 aaKnown RBP17.28■□□□□ 0.36
CLCNKA-203ENST00000439316 RASA2Q15283 850 aa17.28■□□□□ 0.36
CLCNKA-203ENST00000439316 OASLQ15646 514 aaKnown RBP17.28■□□□□ 0.36
CLCNKA-203ENST00000439316 RNASEH2BQ5TBB1 312 aaKnown RBP17.28■□□□□ 0.36
CLCNKA-203ENST00000439316 OR5B17Q8NGF7 314 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms