RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 RNF10Q8N5U6 811 aaKnown RBP12.11□□□□□ -0.47
CECR3-201ENST00000428828 CSGALNACT2Q8N6G5 542 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 ZSWIM2Q8NEG5 633 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 XPO6Q96QU8 1125 aaKnown RBP12.11□□□□□ -0.47
CECR3-201ENST00000428828 DUSP9Q99956 384 aaKnown RBP12.11□□□□□ -0.47
CECR3-201ENST00000428828 TRIM4Q9C037 500 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 ISCUQ9H1K1 167 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 PDZD7Q9H5P4 517 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 ZWILCHQ9H900 591 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 NHEJ1Q9H9Q4 299 aaPredicted RBP12.11□□□□□ -0.47
CECR3-201ENST00000428828 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.11□□□□□ -0.47
CECR3-201ENST00000428828 FAM153AQ9UHL3 310 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 PADI3Q9ULW8 664 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 GMEB1Q9Y692 573 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 GOLGA8IPA6NC78 632 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 TRIM43BA6NCK2 446 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 GOLGA8JA6NMD2 632 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 CES2O00748 559 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 PJA2O43164 708 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 CREB3O43889 395 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 NBNO60934 754 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 ADSSP30520 456 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 HPDP32754 393 aaPredicted RBP12.11□□□□□ -0.47
CECR3-201ENST00000428828 RANBP1P43487 201 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 UBXN1Q04323 297 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 ZNF844Q08AG5 666 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 SPA17Q15506 151 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 TAF11Q15544 211 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 SEZ6Q53EL9 994 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 TRIM43Q96BQ3 446 aaPredicted RBP12.11□□□□□ -0.47
CECR3-201ENST00000428828 MSTO1Q9BUK6 570 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 IFIH1Q9BYX4 1025 aaKnown RBP12.11□□□□□ -0.47
CECR3-201ENST00000428828 HAPLN2Q9GZV7 340 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 EPB41L5Q9HCM4 733 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 ARHGEF3Q9NR81 526 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 RBM12Q9NTZ6 932 aaKnown RBP12.11□□□□□ -0.47
CECR3-201ENST00000428828 AGPAT5Q9NUQ2 364 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 TRAF3IP3Q9Y228 551 aa12.11□□□□□ -0.47
CECR3-201ENST00000428828 TDRD15B5MCY1 1934 aaKnown RBP12.1□□□□□ -0.47
CECR3-201ENST00000428828 GPR182O15218 404 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 CLDN3O15551 220 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 PIGRP01833 764 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 RAG1P15918 1043 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 ATP6V1C1P21283 382 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 ITGB8P26012 769 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 EIF3BP55884 814 aaKnown RBP12.1□□□□□ -0.47
CECR3-201ENST00000428828 OSTNP61366 133 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 ATP11AP98196 1134 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 ADAM9Q13443 819 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 PPP1R15BQ5SWA1 713 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 TWF2Q6IBS0 349 aaKnown RBP12.1□□□□□ -0.47
CECR3-201ENST00000428828 ANO7Q6IWH7 933 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 NOTUMQ6P988 496 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 MPZL3Q6UWV2 235 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 ZPBP2Q6X784 338 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 RDH13Q8NBN7 331 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 TLCD1Q96CP7 247 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 IFT43Q96FT9 208 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 RAB17Q9H0T7 212 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 VPS16Q9H269 839 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 VCXQ9H320 206 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 THAP9Q9H5L6 903 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 HSPBP1Q9NZL4 362 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 PRKAG2Q9UGJ0 569 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 TMCO1Q9UM00 188 aa12.1□□□□□ -0.47
CECR3-201ENST00000428828 EXOC3O60645 756 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 TOM1L1O75674 476 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 ACADSP16219 412 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 SYN1P17600 705 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 GNAZP19086 355 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 HOXA11P31270 313 aaPredicted RBP12.09□□□□□ -0.47
CECR3-201ENST00000428828 HSD17B3P37058 310 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 CASP4P49662 377 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 GUCY2DQ02846 1103 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 PABPC1LQ4VXU2 614 aaKnown RBP12.09□□□□□ -0.47
CECR3-201ENST00000428828 TBC1D1Q86TI0 1168 aaPredicted RBP12.09□□□□□ -0.47
CECR3-201ENST00000428828 THNSL1Q8IYQ7 743 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 CASKIN2Q8WXE0 1202 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 DPF3Q92784 378 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 KCNN1Q92952 543 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 ADPGKQ9BRR6 497 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 HTATIP2Q9BUP3 242 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 EIF2AQ9BY44 585 aaKnown RBP12.09□□□□□ -0.47
CECR3-201ENST00000428828 FAM192AQ9GZU8 254 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 NSRP1Q9H0G5 558 aaKnown RBP12.09□□□□□ -0.47
CECR3-201ENST00000428828 ERVK-5Q9HDB9 667 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 DMAP1Q9NPF5 467 aaPredicted RBP12.09□□□□□ -0.47
CECR3-201ENST00000428828 TAB2Q9NYJ8 693 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 TNFSF13BQ9Y275 285 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 C2CD2Q9Y426 696 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 CETN3O15182 167 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 EVI5O60447 810 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 TIMP1P01033 207 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 RPL13P26373 211 aaKnown RBP12.09□□□□□ -0.47
CECR3-201ENST00000428828 ACOT2P49753 483 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 NCALDP61601 193 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 FKBP3Q00688 224 aaKnown RBP12.09□□□□□ -0.47
CECR3-201ENST00000428828 GPNMBQ14956 572 aa12.09□□□□□ -0.47
CECR3-201ENST00000428828 PCBP1Q15365 356 aaKnown RBP eCLIP12.09□□□□□ -0.47
CECR3-201ENST00000428828 EDRF1Q3B7T1 1238 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms