RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 EDRF1Q3B7T1 1238 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 CENPPQ6IPU0 288 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 INTS8Q75QN2 995 aaKnown RBP11.74□□□□□ -0.53
USP49-204ENST00000423567 PDZD4Q76G19 769 aaPredicted RBP11.74□□□□□ -0.53
USP49-204ENST00000423567 SMYD4Q8IYR2 804 aaPredicted RBP11.74□□□□□ -0.53
USP49-204ENST00000423567 ATAD1Q8NBU5 361 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 CXorf38Q8TB03 319 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 FAM200AQ8TCP9 573 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 SPPL2BQ8TCT7 592 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 PARD3BQ8TEW8 1205 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 NXPE3Q969Y0 559 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 SYAP1Q96A49 352 aaPredicted RBP11.74□□□□□ -0.53
USP49-204ENST00000423567 HS3ST6Q96QI5 342 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 MYADMQ96S97 322 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 TMEM209Q96SK2 561 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 SEPT5Q99719 369 aaPredicted RBP11.74□□□□□ -0.53
USP49-204ENST00000423567 ACBD6Q9BR61 282 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 CORO1BQ9BR76 489 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 ASAH2Q9NR71 780 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 HCFC1R1Q9NWW0 138 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 DNMT3BQ9UBC3 853 aaKnown RBP11.74□□□□□ -0.53
USP49-204ENST00000423567 CDH7Q9ULB5 785 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 PCDHB5Q9Y5E4 795 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 BDP1A6H8Y1 2624 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 FAM86C2PA6NEL3 165 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 LRRIQ3A6PVS8 624 aaPredicted RBP11.73□□□□□ -0.53
USP49-204ENST00000423567 PRR33A8MZF0 331 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 PSMA7O14818 248 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 IKBKBO14920 756 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 N4BP1O75113 896 aaKnown RBP11.73□□□□□ -0.53
USP49-204ENST00000423567 EPB41P11171 864 aaKnown RBP11.73□□□□□ -0.53
USP49-204ENST00000423567 PRCPP42785 496 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 CASP4P49662 377 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 VAMP7P51809 220 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 SIGLEC14Q08ET2 396 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 TDGQ13569 410 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 VEPH1Q14D04 833 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 TAF12Q16514 161 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 WDR72Q3MJ13 1102 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 MGAT5BQ3V5L5 792 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 COBLL1Q53SF7 1204 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 INTS6LQ5JSJ4 861 aaKnown RBP11.73□□□□□ -0.53
USP49-204ENST00000423567 TRIM67Q6ZTA4 783 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 MTSS1LQ765P7 747 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 ITIH5Q86UX2 942 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 FAM186BQ8IYM0 893 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 SPATA20Q8TB22 786 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 ERCC4Q92889 916 aaPredicted RBP11.73□□□□□ -0.53
USP49-204ENST00000423567 RTP3Q9BQQ7 232 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 SNX25Q9H3E2 840 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 KCNK12Q9HB15 430 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 AVENQ9NQS1 362 aaPredicted RBP11.73□□□□□ -0.53
USP49-204ENST00000423567 ABI2Q9NYB9 513 aaPredicted RBP11.73□□□□□ -0.53
USP49-204ENST00000423567 SLC27A5Q9Y2P5 690 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 ASB3Q9Y575 518 aa11.73□□□□□ -0.53
USP49-204ENST00000423567 ANK1P16157 1881 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 AKAP3O75969 853 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 STAU1O95793 577 aaKnown RBP11.72□□□□□ -0.53
USP49-204ENST00000423567 CST3P01034 146 aaPredicted RBP11.72□□□□□ -0.53
USP49-204ENST00000423567 FAM163BP0C2L3 166 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 MYL4P12829 197 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 P4HA1P13674 534 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 WARSP23381 471 aaKnown RBP11.72□□□□□ -0.53
USP49-204ENST00000423567 ACAT1P24752 427 aaKnown RBP11.72□□□□□ -0.53
USP49-204ENST00000423567 MYL6P60660 151 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 CLDN10P78369 228 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 ENPEPQ07075 957 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 NCOA4Q13772 614 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 MAPRE1Q15691 268 aaKnown RBP11.72□□□□□ -0.53
USP49-204ENST00000423567 SOWAHAQ2M3V2 549 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 ZNF699Q32M78 642 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 ZCWPW2Q504Y3 356 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 ZNF667Q5HYK9 610 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 TDRD10Q5VZ19 366 aaKnown RBP11.72□□□□□ -0.53
USP49-204ENST00000423567 SPATA2LQ8IUW3 424 aaPredicted RBP11.72□□□□□ -0.53
USP49-204ENST00000423567 CCDC150Q8NCX0 1101 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 PLEKHO2Q8TD55 490 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 ZNF516Q92618 1163 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 FGF13Q92913 245 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 LRFN3Q9BTN0 628 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 MKNK1Q9BUB5 465 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 IMPG2Q9BZV3 1241 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 GDE1Q9NZC3 331 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 CEP72Q9P209 647 aa11.72□□□□□ -0.53
USP49-204ENST00000423567 NXF1Q9UBU9 619 aaKnown RBP11.72□□□□□ -0.53
USP49-204ENST00000423567 MTCL1Q9Y4B5 1905 aaKnown RBP11.72□□□□□ -0.53
USP49-204ENST00000423567 TMEM221A6NGB7 291 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 M0R296 226 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 GABRDO14764 452 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 STX10O60499 249 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 TACC1O75410 805 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 MICAL2O94851 1124 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 VNN2O95498 520 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 FGF19O95750 216 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 C4BPAP04003 597 aaKnown RBP11.71□□□□□ -0.53
USP49-204ENST00000423567 HAPLN1P10915 354 aaPredicted RBP11.71□□□□□ -0.53
USP49-204ENST00000423567 TRIM21P19474 475 aaKnown RBP11.71□□□□□ -0.53
USP49-204ENST00000423567 GNL1P36915 607 aaPredicted RBP11.71□□□□□ -0.53
USP49-204ENST00000423567 PIK3CAP42336 1068 aa11.71□□□□□ -0.53
USP49-204ENST00000423567 DLG4P78352 724 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms