RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 WEE2P0C1S8 567 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 COL6A1P12109 1028 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 RPL9P32969 192 aaKnown RBP6.34□□□□□ -1.39
HMGB3-202ENST00000419110 NOP2P46087 812 aaKnown RBP6.34□□□□□ -1.39
HMGB3-202ENST00000419110 NOMO3P69849 1222 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 CKAP4Q07065 602 aaKnown RBP6.34□□□□□ -1.39
HMGB3-202ENST00000419110 TUBB2AQ13885 445 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 MBTPS1Q14703 1052 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 ZBTB6Q15916 424 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 ZNF394Q53GI3 561 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 PLEKHG4Q58EX7 1191 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 C1orf53Q5VUE5 145 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 NAA35Q5VZE5 725 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 C11orf63Q6NUN7 778 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 ALKAL1Q6UXT8 129 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 AGMOQ6ZNB7 445 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 SLC24A5Q71RS6 500 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 NECAB2Q7Z6G3 386 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 MRPL10Q7Z7H8 261 aaKnown RBP6.34□□□□□ -1.39
HMGB3-202ENST00000419110 PALB2Q86YC2 1186 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 PASD1Q8IV76 773 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 LRRC43Q8N309 656 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 TOP6BLQ8N6T0 577 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 TTC13Q8NBP0 860 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 TMEM35BQ8NCS4 154 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 MNS1Q8NEH6 495 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 APPL2Q8NEU8 664 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 OLIG1Q8TAK6 271 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 CXorf38Q8TB03 319 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 ZNF564Q8TBZ8 553 aaPredicted RBP6.34□□□□□ -1.39
HMGB3-202ENST00000419110 SPATA18Q8TC71 538 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 DIS3LQ8TF46 1054 aaKnown RBP6.34□□□□□ -1.39
HMGB3-202ENST00000419110 LINC01599Q8WXQ3 324 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 TNIP3Q96KP6 325 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 WDR24Q96S15 920 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 TUBB2BQ9BVA1 445 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 PACSIN1Q9BY11 444 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 PPP1R12CQ9BZL4 782 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 LACRTQ9GZZ8 138 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 MIS12Q9H081 205 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 SNX25Q9H3E2 840 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 IL21Q9HBE4 155 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 GOLGA2P5Q9HBQ8 144 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 AVENQ9NQS1 362 aaPredicted RBP6.34□□□□□ -1.39
HMGB3-202ENST00000419110 RGS18Q9NS28 235 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 TMEM161AQ9NX61 479 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 CTTNBP2NLQ9P2B4 639 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 UVRAGQ9P2Y5 699 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 LCMT1Q9UIC8 334 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 TBX21Q9UL17 535 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 STRIP2Q9ULQ0 834 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 PCDHGC3Q9UN70 934 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 HYOU1Q9Y4L1 999 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 PCDHGC5Q9Y5F6 944 aa6.34□□□□□ -1.39
HMGB3-202ENST00000419110 PCNTO95613 3336 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 GREB1Q4ZG55 1949 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 A0A0U1RQJ8 604 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 CASTOR2A6NHX0 329 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 MEIS3P2A8K0S8 358 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 KPNA7A9QM74 516 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 C9IYK1 514 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 PIRO00625 290 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 PPEF2O14830 753 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 BUB1O43683 1085 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 URI1O94763 535 aaPredicted RBP6.33□□□□□ -1.4
HMGB3-202ENST00000419110 EOMESO95936 686 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 CST3P01034 146 aaPredicted RBP6.33□□□□□ -1.4
HMGB3-202ENST00000419110 SETSIPP0DME0 302 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 VDRP11473 427 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 DESP17661 470 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 CHRNB2P17787 502 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 NDST1P52848 882 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 BCAT1P54687 386 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 GALCP54803 685 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 TLE2Q04725 743 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 RNASELQ05823 741 aaKnown RBP6.33□□□□□ -1.4
HMGB3-202ENST00000419110 SOX4Q06945 474 aaPredicted RBP6.33□□□□□ -1.4
HMGB3-202ENST00000419110 GOLGA7BQ2TAP0 167 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 NOMO2Q5JPE7 1267 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 DNAJC24Q6P3W2 148 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 CNKSR3Q6P9H4 555 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 SLC39A5Q6ZMH5 540 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 Q6ZNB5 142 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 MON1BQ7L1V2 547 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 ZNF598Q86UK7 904 aaKnown RBP6.33□□□□□ -1.4
HMGB3-202ENST00000419110 UNC93AQ86WB7 457 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 NPAS4Q8IUM7 802 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 TMEM86AQ8N2M4 240 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 DNAJC5GQ8N7S2 189 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 C1orf131Q8NDD1 294 aaKnown RBP6.33□□□□□ -1.4
HMGB3-202ENST00000419110 SLC30A5Q8TAD4 765 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 ATRIPQ8WXE1 791 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 DDX1Q92499 740 aaKnown RBP6.33□□□□□ -1.4
HMGB3-202ENST00000419110 TMEM176AQ96HP8 235 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 FAM193BQ96PV7 902 aaPredicted RBP6.33□□□□□ -1.4
HMGB3-202ENST00000419110 C11orf70Q9BRQ4 267 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 ZNF518BQ9C0D4 1074 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 ELOVL4Q9GZR5 314 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 SDCBP2Q9H190 292 aa6.33□□□□□ -1.4
HMGB3-202ENST00000419110 WNT8AQ9H1J5 351 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms