RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TCF15Q12870 199 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 PUM1Q14671 1186 aaKnown RBP eCLIP3.26□□□□□ -1.89
VPS41-206ENST00000418457 SAFBQ15424 915 aaKnown RBP eCLIP3.26□□□□□ -1.89
VPS41-206ENST00000418457 PREPLQ4J6C6 727 aaPredicted RBP3.26□□□□□ -1.89
VPS41-206ENST00000418457 AMOTQ4VCS5 1084 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 LY6G5CQ5SRR4 150 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 FAM160B1Q5W0V3 765 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 KCNV1Q6PIU1 500 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 SLC30A10Q6XR72 485 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 COLGALT2Q8IYK4 626 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 Q8NA96 180 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 ZNF483Q8TF39 744 aaPredicted RBP3.26□□□□□ -1.89
VPS41-206ENST00000418457 LENG9Q96B70 501 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 APIPQ96GX9 242 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 ADAM2Q99965 735 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 TMEM74BQ9NUR3 256 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 ETAA1Q9NY74 926 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 GPRC5BQ9NZH0 403 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 VSX1Q9NZR4 365 aaPredicted RBP3.26□□□□□ -1.89
VPS41-206ENST00000418457 CTTNBP2NLQ9P2B4 639 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 SRRDQ9UH36 339 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 FAM50BQ9Y247 325 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 SUPT6HQ7KZ85 1726 aaKnown RBP3.26□□□□□ -1.89
VPS41-206ENST00000418457 FGD6Q6ZV73 1430 aa3.26□□□□□ -1.89
VPS41-206ENST00000418457 EHBP1L1Q8N3D4 1523 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 CENPVL1A0A0U1RR11 272 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 A0A1W2PS29 197 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 MYADML2A6NDP7 307 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 UNC119BA6NIH7 251 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 ISM1B1AKI9 464 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 NPIPB8E9PQR5 432 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 MYO1CO00159 1063 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 MYO1FO00160 1098 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 BTN3A1O00481 513 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 TBX3O15119 743 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 PQBP1O60828 265 aaKnown RBP3.25□□□□□ -1.89
VPS41-206ENST00000418457 SOAT2O75908 522 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 SUN1O94901 812 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 ZNF202O95125 648 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 ZFPL1O95159 310 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 SPDEFO95238 335 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 MAP4K4O95819 1239 aaPredicted RBP3.25□□□□□ -1.89
VPS41-206ENST00000418457 NBPF7P0C2Y1 421 aaPredicted RBP3.25□□□□□ -1.89
VPS41-206ENST00000418457 PHKG2P15735 406 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 TNFRSF1AP19438 455 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 SLC11A2P49281 568 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 ANXA11P50995 505 aaKnown RBP3.25□□□□□ -1.89
VPS41-206ENST00000418457 VAV2P52735 878 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 RPS7P62081 194 aaKnown RBP3.25□□□□□ -1.89
VPS41-206ENST00000418457 FPGSQ05932 587 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 SLC13A2Q13183 592 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 RAB32Q13637 225 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 CNGA2Q16280 664 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 CYP2A13Q16696 494 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 GEN1Q17RS7 908 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 SLC44A4Q53GD3 710 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 FNDC7Q5VTL7 733 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 LMBRD2Q68DH5 695 aaPredicted RBP3.25□□□□□ -1.89
VPS41-206ENST00000418457 RHOUQ7L0Q8 258 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 PPP1R32Q7Z5V6 425 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 MRGPREQ86SM8 312 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 ARHGEF19Q8IW93 802 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 CCDC146Q8IYE0 955 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 PSD4Q8NDX1 1056 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 PJA1Q8NG27 643 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 POC1BQ8TC44 478 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 PROKR1Q8TCW9 393 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 SNX19Q92543 992 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 TMEM125Q96AQ2 219 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 NACC2Q96BF6 587 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 LRIG1Q96JA1 1093 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 APOL5Q9BWW9 433 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 DPH1Q9BZG8 443 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 NUP62CLQ9H1M0 184 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 MMRN2Q9H8L6 949 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 ZNF287Q9HBT7 754 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 ARNT2Q9HBZ2 717 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 KIAA1586Q9HCI6 787 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 SACM1LQ9NTJ5 587 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 MRPS18AQ9NVS2 196 aaKnown RBP3.25□□□□□ -1.89
VPS41-206ENST00000418457 CPNE7Q9UBL6 633 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 DKK2Q9UBU2 259 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 HESX1Q9UBX0 185 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 OGDHLQ9ULD0 1010 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 TMX2Q9Y320 296 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 PAXBP1Q9Y5B6 917 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 RAD54BQ9Y620 910 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 CNTLNQ9NXG0 1405 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 CARMIL1Q5VZK9 1371 aa3.25□□□□□ -1.89
VPS41-206ENST00000418457 URB2Q14146 1524 aaKnown RBP3.24□□□□□ -1.89
VPS41-206ENST00000418457 ZBED9Q6R2W3 1325 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 TRGV11A0A075B6L2 103 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 KRTAP4-8A0A0G2JLE6 195 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 APAF1O14727 1248 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 PMM2O15305 246 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 PLIN1O60240 522 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 ADH4P08319 380 aa3.24□□□□□ -1.89
VPS41-206ENST00000418457 ATXN1LP0C7T5 689 aaKnown RBP3.24□□□□□ -1.89
VPS41-206ENST00000418457 ZKSCAN1P17029 563 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms