RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ITPK1Q13572 414 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 BTG3Q14201 252 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 COG2Q14746 738 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 USH1GQ495M9 461 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 SLC44A4Q53GD3 710 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 HSP90AA5PQ58FG0 334 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 HP1BP3Q5SSJ5 553 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 CC2D2BQ6DHV5 1058 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 FBXL19Q6PCT2 694 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 SLFN12Q8IYM2 578 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 MZB1Q8WU39 189 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 CEP95Q96GE4 821 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 C1orf21Q9H246 121 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 C12orf65Q9H3J6 166 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 TAGLN3Q9UI15 199 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 TELO2Q9Y4R8 837 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 RBM47A0AV96 593 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 ALOX15BO15296 676 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 YY1P25490 414 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 NOVP48745 357 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 PDIA2Q13087 525 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 SLC15A2Q16348 729 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 NADK2Q4G0N4 442 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 CAPN12Q6ZSI9 719 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 NLRX1Q86UT6 975 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 DZIP1Q86YF9 867 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 METTL25Q8N6Q8 603 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 ERMNQ8TAM6 284 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 FNDC8Q8TC99 324 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 MAF1Q9H063 256 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 ALG13Q9NP73 1137 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 ADAMTS6Q9UKP5 1117 aa8.43□□□□□ -1.06
HMGXB4-202ENST00000418170 FAM237BA0A1B0GVD1 139 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 NTSR2O95665 410 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 RALAP11233 206 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 CPA3P15088 417 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 ZFXP17010 805 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 KLRK1P26718 216 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 PEX2P28328 305 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 CYP2J2P51589 502 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 FMO1Q01740 532 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 RASA3Q14644 834 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 PARP10Q53GL7 1025 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 ASPRV1Q53RT3 343 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 ZFP28Q8NHY6 868 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 PYDC1Q8WXC3 89 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 ZFRQ96KR1 1074 aaKnown RBP8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 FAM118BQ9BPY3 351 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 ARHGEF38Q9NXL2 777 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 KCNK4Q9NYG8 393 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 MINPP1Q9UNW1 487 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 ATF5Q9Y2D1 282 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 PNMA6FA0A0J9YX94 578 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 BIRC5O15392 142 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 PPP1R11O60927 126 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 FDX1P10109 184 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 NMT1P30419 496 aaKnown RBP8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 STIP1P31948 543 aaKnown RBP8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 KDSRQ06136 332 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 SF3B3Q15393 1217 aaKnown RBP8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 ADRM1Q16186 407 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 CLEC16AQ2KHT3 1053 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 KLHL35Q6PF15 583 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 ADGRD1Q6QNK2 874 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 GSTA5Q7RTV2 222 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 FAM71AQ8IYT1 594 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 MARVELD2Q8N4S9 558 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 GSTCDQ8NEC7 633 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 GDPD5Q8WTR4 605 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 MBOAT7Q96N66 472 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 DHRS4Q9BTZ2 278 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 HEMGNQ9BXL5 484 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 OXCT2Q9BYC2 517 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 BHMT2Q9H2M3 363 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 ACP6Q9NPH0 428 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 AGPAT3Q9NRZ7 376 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 FAIMQ9NVQ4 179 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 PLK2Q9NYY3 685 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 ANAPC7Q9UJX3 599 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 RGPD3A6NKT7 1758 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 RGPD4Q7Z3J3 1758 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 CYP3A7-CYP3A51PA0A087WV96 503 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 A0A088AWK7 358 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 DCAF8L1A6NGE4 600 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 CCDC160A6NGH7 325 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 PEX1O43933 1283 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 CYP3A7P24462 503 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 MAPK4P31152 587 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 ETV4P43268 484 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 CDK8P49336 464 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 PTP4A2Q12974 167 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 NCOA4Q13772 614 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 EFHC1Q5JVL4 640 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 TRIM67Q6ZTA4 783 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 C16orf86Q6ZW13 317 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 PASD1Q8IV76 773 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 CEP70Q8NHQ1 597 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 RABGEF1Q9UJ41 708 aa8.42□□□□□ -1.06
HMGXB4-202ENST00000418170 FOCADQ5VW36 1801 aa8.41□□□□□ -1.06
HMGXB4-202ENST00000418170 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms