RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 DNAJC9Q8WXX5 260 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 SYN2Q92777 582 aaPredicted RBP13.45□□□□□ -0.26
SCAF8-203ENST00000417268 SERPINI1Q99574 410 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 PI4K2AQ9BTU6 479 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 STMN1P16949 149 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 ITGB5P18084 799 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 CASP4P49662 377 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 MRPS35P82673 323 aaKnown RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 MAPRE1Q15691 268 aaKnown RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 CCDC60Q8IWA6 550 aaPredicted RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 ZNF507Q8TCN5 953 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 TMEM169Q96HH4 297 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 CGRRF1Q99675 332 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 DLGAP2Q9P1A6 1054 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 MAGED2Q9UNF1 606 aaPredicted RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 SPATA31C2B4DYI2 1134 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 FKTNO75072 461 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 KCNA3P22001 575 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 SLC1A1P43005 524 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 CAV1Q03135 178 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 GLRA4Q5JXX5 417 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 KIAA1755Q5JYT7 1200 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 AGGF1Q8N302 714 aaeCLIP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 RNF25Q96BH1 459 aaPredicted RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 ZMAT2Q96NC0 199 aaKnown RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 SMYD2Q9NRG4 433 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 CICQ96RK0 1608 aaPredicted RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 RGPD1P0DJD0 1748 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 SCN11AQ9UI33 1791 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 IGKV6D-41A0A0C4DH26 115 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 COPEO14579 308 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 NFKBIAP25963 317 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 SCTRP47872 440 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 ART3Q13508 389 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 HP1BP3Q5SSJ5 553 aaPredicted RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 NOL9Q5SY16 702 aaKnown RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 WDR75Q8IWA0 830 aaKnown RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 NMRK2Q9NPI5 230 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 DMGDHQ9UI17 866 aaKnown RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 RAB21Q9UL25 225 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 RGPD5Q99666 1765 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 ACKR2O00590 384 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 NVLO15381 856 aaKnown RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 ANP32DO95626 131 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 MCF2P10911 925 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 EEF1B2P24534 225 aaKnown RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 ACADSBP45954 432 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 GALCP54803 685 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 SOX10P56693 466 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 KRT17Q04695 432 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 NME3Q13232 169 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 NCAPHQ15003 741 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 JADE1Q6IE81 842 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 TRIM59Q8IWR1 403 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 SH3TC2Q8TF17 1288 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 TRAPPC12Q8WVT3 735 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 ERP27Q96DN0 273 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 DTNBP1Q96EV8 351 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 DNAJC18Q9H819 358 aa13.44□□□□□ -0.26
SCAF8-203ENST00000417268 TTC7AQ9ULT0 858 aaPredicted RBP13.44□□□□□ -0.26
SCAF8-203ENST00000417268 MGEA5O60502 916 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 DEUP1Q05D60 604 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 CUL2Q13617 745 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 PDCD2Q16342 344 aaPredicted RBP13.43□□□□□ -0.26
SCAF8-203ENST00000417268 GRAMD4Q6IC98 578 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 IL31RAQ8NI17 732 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 ATP11BQ9Y2G3 1177 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 GSTA1P08263 222 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 GSTA2P09210 222 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 SSTR3P32745 418 aaPredicted RBP13.43□□□□□ -0.26
SCAF8-203ENST00000417268 RAB27AP51159 221 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 CNPY4Q8N129 248 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 SDCCAG3Q96C92 435 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 CFAP36Q96G28 342 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 PURBQ96QR8 312 aaKnown RBP13.43□□□□□ -0.26
SCAF8-203ENST00000417268 MTMR12Q9C0I1 747 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 FAM49BQ9NUQ9 324 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 TRAF3IP3Q9Y228 551 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 HEY1Q9Y5J3 304 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 NRCAMQ92823 1304 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 DNAJC6O75061 913 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 AKAP3O75969 853 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 THP07101 528 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 ODC1P11926 461 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 PDGFRAP16234 1089 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 HSD17B3P37058 310 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 RGS7P49802 495 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 NAB2Q15742 525 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 RNF219Q5W0B1 726 aaPredicted RBP13.43□□□□□ -0.26
SCAF8-203ENST00000417268 WDR49Q8IV35 697 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 SLC30A5Q8TAD4 765 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 CPA5Q8WXQ8 436 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 ISCUQ9H1K1 167 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 DHX35Q9H5Z1 703 aaKnown RBP13.43□□□□□ -0.26
SCAF8-203ENST00000417268 SNCAIPQ9Y6H5 919 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 H3BRJ5 948 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 KRT37O76014 449 aa13.43□□□□□ -0.26
SCAF8-203ENST00000417268 CTCFP49711 727 aaPredicted RBP13.43□□□□□ -0.26
SCAF8-203ENST00000417268 BCAR1P56945 870 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms