RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 CCDC197Q8NCU1 140 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 FAXDC2Q96IV6 333 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 LHX5Q9H2C1 402 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 ACTR5Q9H9F9 607 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 TXNRD2Q9NNW7 524 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 NXF1Q9UBU9 619 aaKnown RBP12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 DNPEPQ9ULA0 475 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 POLR2AP24928 1970 aaKnown RBP12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 SPDYE5A6NIY4 337 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 CD19P15391 556 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 OSBPP22059 807 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 STAT4Q14765 748 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 Q3C1V9 767 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 ZNF667Q5HYK9 610 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 FBXO16Q8IX29 292 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 TRAPPC12Q8WVT3 735 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 TMEM51Q9NW97 253 aa12.13□□□□□ -0.47
TRAFD1-202ENST00000412615 LOC102724159A0A0B4J2E5 919 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 NDC80O14777 642 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 B4GALT5O43286 388 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 KRT19P08727 400 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 MBTD1Q05BQ5 628 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 ACTN3Q08043 901 aaPredicted RBP12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 TTLL4Q14679 1199 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 PWP2Q15269 919 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 CYP4A22Q5TCH4 519 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 EEF1DP3Q658K8 133 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 DENND1BQ6P3S1 775 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 POLNQ7Z5Q5 900 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 ALLCQ8N6M5 410 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 CEP120Q8N960 986 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 PWWP2AQ96N64 755 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 RBM15Q96T37 977 aaKnown RBP eCLIP12.12□□□□□ -0.471e-7■■■■□ 25.1
TRAFD1-202ENST00000412615 NFKBIZQ9BYH8 718 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 NSRP1Q9H0G5 558 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 CDT1Q9H211 546 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 MROH8Q9H579 483 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 PRMT7Q9NVM4 692 aaPredicted RBP12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 KCNH4Q9UQ05 1017 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 hCG_1818297A0A087WSY0 165 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 LRRD1A4D1F6 860 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 SIGLEC16A6NMB1 481 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 DNALI1O14645 258 aaPredicted RBP12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 CDH16O75309 829 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 GJB1P08034 283 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 VIMP08670 466 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 KRT3P12035 628 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 MAGEA4P43358 317 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 CLCN3P51790 818 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 POU5F1BQ06416 359 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 WDR78Q5VTH9 848 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 PIGWQ7Z7B1 504 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 LRRC34Q8IZ02 419 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 DYDC1Q8WWB3 177 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 COPS5Q92905 334 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 CLMNQ96JQ2 1002 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 ZNF668Q96K58 619 aaPredicted RBP12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 OSBPL7Q9BZF2 842 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 ERAP1Q9NZ08 941 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 SAMD15Q9P1V8 674 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 LGALS13Q9UHV8 139 aa12.12□□□□□ -0.47
TRAFD1-202ENST00000412615 TMEM120BA0PK00 339 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 KRT7P08729 469 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 ABHD2P08910 425 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 CXCL8P10145 99 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 PSMA2P25787 234 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 CDKN2BP42772 138 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 ARSEP51690 589 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 PPIL2Q13356 520 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 ITIH4Q14624 930 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 WDR72Q3MJ13 1102 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 FASTKD5Q7L8L6 764 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 CDR2LQ86X02 465 aaPredicted RBP12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 NKD2Q969F2 451 aaPredicted RBP12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 CFAP57Q96MR6 1250 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 BCO2Q9BYV7 579 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 WDR35Q9P2L0 1181 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 TPX2Q9ULW0 747 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 POLIQ9UNA4 740 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 EFR3BQ9Y2G0 817 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 RFC1P35251 1148 aaPredicted RBP12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 PHKA2P46019 1235 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 IFNAR2P48551 515 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 VCPP55072 806 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 TNFAIP2Q03169 654 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 HADHQ16836 314 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 PTPN20Q4JDL3 420 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 ZNF484Q5JVG2 852 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 TXNRD3NBQ6F5E7 133 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 PRUNE1Q86TP1 453 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 CNPY4Q8N129 248 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 FNIP1Q8TF40 1166 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 KAT2BQ92831 832 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 C9orf72Q96LT7 481 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 TTC25Q96NG3 672 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 FHDC1Q9C0D6 1143 aaPredicted RBP12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 KDM4CQ9H3R0 1056 aa12.11□□□□□ -0.47
TRAFD1-202ENST00000412615 LRRC37A2A6NM11 1700 aa12.1□□□□□ -0.47
TRAFD1-202ENST00000412615 ASB14A6NK59 587 aa12.1□□□□□ -0.47
TRAFD1-202ENST00000412615 GOLGA8SH3BPF8 625 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms