RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 PRSS36Q5K4E3 855 aa17.38■□□□□ 0.37
DDR1-230ENST00000412274 ZNF658Q5TYW1 1059 aaPredicted RBP17.38■□□□□ 0.37
DDR1-230ENST00000412274 LMBRD2Q68DH5 695 aaPredicted RBP17.38■□□□□ 0.37
DDR1-230ENST00000412274 HFE2Q6ZVN8 426 aa17.38■□□□□ 0.37
DDR1-230ENST00000412274 INTS8Q75QN2 995 aaKnown RBP17.38■□□□□ 0.37
DDR1-230ENST00000412274 FBXL6Q8N531 539 aa17.38■□□□□ 0.37
DDR1-230ENST00000412274 ATAD1Q8NBU5 361 aa17.38■□□□□ 0.37
DDR1-230ENST00000412274 TAF4BQ92750 862 aa17.38■□□□□ 0.37
DDR1-230ENST00000412274 PSMG2Q969U7 264 aa17.38■□□□□ 0.37
DDR1-230ENST00000412274 FUBP3Q96I24 572 aaKnown RBP eCLIP17.38■□□□□ 0.37
DDR1-230ENST00000412274 CEP72Q9P209 647 aa17.38■□□□□ 0.37
DDR1-230ENST00000412274 WNT16Q9UBV4 365 aa17.38■□□□□ 0.37
DDR1-230ENST00000412274 VNN2O95498 520 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 CST3P01034 146 aaPredicted RBP17.37■□□□□ 0.37
DDR1-230ENST00000412274 KRT13P13646 458 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 P4HA1P13674 534 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 WARSP23381 471 aaKnown RBP17.37■□□□□ 0.37
DDR1-230ENST00000412274 NR2F2P24468 414 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 PSMC2P35998 433 aaKnown RBP17.37■□□□□ 0.37
DDR1-230ENST00000412274 ADAM9Q13443 819 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 PNOCQ13519 176 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 STIM1Q13586 685 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 INTS6LQ5JSJ4 861 aaKnown RBP17.37■□□□□ 0.37
DDR1-230ENST00000412274 CEP135Q66GS9 1140 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 C4orf50Q6ZRC1 276 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 NPAS3Q8IXF0 933 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 CEP295NLQ96MC4 621 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 TMEM209Q96SK2 561 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 MMS19Q96T76 1030 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 MKNK1Q9BUB5 465 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 CDH9Q9ULB4 789 aa17.37■□□□□ 0.37
DDR1-230ENST00000412274 ECI2O75521 394 aa17.36■□□□□ 0.37
DDR1-230ENST00000412274 C4BPAP04003 597 aaKnown RBP17.36■□□□□ 0.37
DDR1-230ENST00000412274 HAPLN1P10915 354 aaPredicted RBP17.36■□□□□ 0.37
DDR1-230ENST00000412274 RPL10AP62906 217 aaKnown RBP17.36■□□□□ 0.37
DDR1-230ENST00000412274 BIRC3Q13489 604 aa17.36■□□□□ 0.37
DDR1-230ENST00000412274 TAF12Q16514 161 aa17.36■□□□□ 0.37
DDR1-230ENST00000412274 SGSM1Q2NKQ1 1148 aa17.36■□□□□ 0.37
DDR1-230ENST00000412274 WDR72Q3MJ13 1102 aa17.36■□□□□ 0.37
DDR1-230ENST00000412274 MGAT5BQ3V5L5 792 aa17.36■□□□□ 0.37
DDR1-230ENST00000412274 CFAP221Q4G0U5 840 aa17.36■□□□□ 0.37
DDR1-230ENST00000412274 ZNF516Q92618 1163 aa17.36■□□□□ 0.37
DDR1-230ENST00000412274 E2F7Q96AV8 911 aa17.36■□□□□ 0.37
DDR1-230ENST00000412274 TSG101Q99816 390 aa17.36■□□□□ 0.37
DDR1-230ENST00000412274 SLC2A4RGQ9NR83 387 aa17.36■□□□□ 0.37
DDR1-230ENST00000412274 SLC27A5Q9Y2P5 690 aa17.36■□□□□ 0.37
DDR1-230ENST00000412274 NUMBLQ9Y6R0 609 aa17.36■□□□□ 0.37
DDR1-230ENST00000412274 MYO10Q9HD67 2058 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 LRRIQ3A6PVS8 624 aaPredicted RBP17.35■□□□□ 0.37
DDR1-230ENST00000412274 SOBPA7XYQ1 873 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 CETN3O15182 167 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 STX10O60499 249 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 VAMP7P51809 220 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 MCCD1P59942 119 aaPredicted RBP17.35■□□□□ 0.37
DDR1-230ENST00000412274 PFKPQ01813 784 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 SLC5A9Q2M3M2 681 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 ZACNQ401N2 412 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 ZCWPW2Q504Y3 356 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 DNAJB7Q7Z6W7 309 aaPredicted RBP17.35■□□□□ 0.37
DDR1-230ENST00000412274 LRRTM3Q86VH5 581 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 FAM186BQ8IYM0 893 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 FAM200AQ8TCP9 573 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 ELSPBP1Q96BH3 223 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 SEPT5Q99719 369 aaPredicted RBP17.35■□□□□ 0.37
DDR1-230ENST00000412274 GZF1Q9H116 711 aaPredicted RBP17.35■□□□□ 0.37
DDR1-230ENST00000412274 CRISPLD1Q9H336 500 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 SNX25Q9H3E2 840 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 ABI2Q9NYB9 513 aaPredicted RBP17.35■□□□□ 0.37
DDR1-230ENST00000412274 FBXL21Q9UKT6 434 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 MAPK8IP1Q9UQF2 711 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 PCDHA5Q9Y5H7 936 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 DOCK8Q8NF50 2099 aa17.35■□□□□ 0.37
DDR1-230ENST00000412274 TRIM21P19474 475 aaKnown RBP17.34■□□□□ 0.37
DDR1-230ENST00000412274 CDC25CP30307 473 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 GTF2H1P32780 548 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 GNL1P36915 607 aaPredicted RBP17.34■□□□□ 0.37
DDR1-230ENST00000412274 MAGEA11P43364 429 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 CASP4P49662 377 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 UBE2HP62256 183 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 FKBP3Q00688 224 aaKnown RBP17.34■□□□□ 0.37
DDR1-230ENST00000412274 LRRC63Q05C16 580 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 NCOA4Q13772 614 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 ARHGAP15Q53QZ3 475 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 ZNF667Q5HYK9 610 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 FAM171BQ6P995 826 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 PARM1Q6UWI2 310 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 SPATA2LQ8IUW3 424 aaPredicted RBP17.34■□□□□ 0.37
DDR1-230ENST00000412274 MCRS1Q96EZ8 462 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 GCNAQ96QF7 691 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 LRRC3Q9BY71 257 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 DNAI2Q9GZS0 605 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 XYLT2Q9H1B5 865 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 DNAJC25Q9H1X3 360 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 MFSD1Q9H3U5 465 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 TRPV4Q9HBA0 871 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 ZFP14Q9HCL3 533 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 EHD2Q9NZN4 543 aa17.34■□□□□ 0.37
DDR1-230ENST00000412274 UXTQ9UBK9 157 aaPredicted RBP17.34■□□□□ 0.37
DDR1-230ENST00000412274 NOTCH4Q99466 2003 aa17.33■□□□□ 0.37
DDR1-230ENST00000412274 PSMA7O14818 248 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms