RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 STXBP5LQ9Y2K9 1186 aa25.19■■□□□ 1.62
TSPAN4-203ENST00000397397 FOXN3O00409 490 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-203ENST00000397397 CXCL14O95715 111 aa25.18■■□□□ 1.62
TSPAN4-203ENST00000397397 ACAT1P24752 427 aaKnown RBP25.18■■□□□ 1.62
TSPAN4-203ENST00000397397 JAM2P57087 298 aa25.18■■□□□ 1.62
TSPAN4-203ENST00000397397 ZNF394Q53GI3 561 aa25.18■■□□□ 1.62
TSPAN4-203ENST00000397397 WHAMMQ8TF30 809 aa25.18■■□□□ 1.62
TSPAN4-203ENST00000397397 GPR88Q9GZN0 384 aa25.18■■□□□ 1.62
TSPAN4-203ENST00000397397 TMEM265A0A087WTH1 108 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 A0A1W2PQJ5 194 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 F8VZ95 297 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 GYPCP04921 128 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 TPM1P09493 284 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 PNMA6AP0CW24 399 aaPredicted RBP25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 PCSK1P29120 753 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 ORC1Q13415 861 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 SMC1AQ14683 1233 aaKnown RBP25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 PTPN14Q15678 1187 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 PLPP4Q5VZY2 271 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 RBBP8NLQ8NC74 664 aaPredicted RBP25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 MICAL1Q8TDZ2 1067 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 BAP1Q92560 729 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 TWNKQ96RR1 684 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 ACBD6Q9BR61 282 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 NT5C1AQ9BXI3 368 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 ELOVL4Q9GZR5 314 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 MTRRQ9UBK8 725 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 CAPN11Q9UMQ6 739 aa25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 COL4A4P53420 1690 aaPredicted RBP25.17■■□□□ 1.62
TSPAN4-203ENST00000397397 OR6C75A6NL08 312 aa25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 RFXAPO00287 272 aa25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 STAT1P42224 750 aa25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 CAMK1Q14012 370 aa25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 GPR65Q8IYL9 337 aa25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 ZNF397Q8NF99 534 aaPredicted RBP25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 OR10T2Q8NGX3 314 aa25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 CDX2Q99626 313 aaPredicted RBP25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 SYT15Q9BQS2 421 aa25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 OXCT2Q9BYC2 517 aaPredicted RBP25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 DNAI2Q9GZS0 605 aa25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 LMAN2LQ9H0V9 348 aa25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 DPEP3Q9H4B8 488 aa25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 NGRNQ9NPE2 291 aaKnown RBP25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 CDH9Q9ULB4 789 aa25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 CNTN6Q9UQ52 1028 aa25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 BACE2Q9Y5Z0 518 aa25.16■■□□□ 1.62
TSPAN4-203ENST00000397397 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 RNF225M0QZC1 329 aaPredicted RBP25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 FSCN2O14926 492 aa25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 TBC1D4O60343 1298 aa25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 LPXNO60711 386 aa25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 LILRB3O75022 631 aa25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 RPL17P18621 184 aaKnown RBP25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 CASP14P31944 242 aa25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 SOX5P35711 763 aa25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 RAD23BP54727 409 aa25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 PSMC1P62191 440 aaKnown RBP25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 TSPY1Q01534 308 aa25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 GRIN2CQ14957 1233 aa25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 ACOT1Q86TX2 421 aa25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 ANP32BQ92688 251 aaKnown RBP25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 TMEM176AQ96HP8 235 aa25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 TMEM209Q96SK2 561 aa25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 LUC7L2Q9Y383 392 aaKnown RBP25.15■■□□□ 1.62
TSPAN4-203ENST00000397397 ATP2C2O75185 946 aa25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 IRS1P35568 1242 aa25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 ZBED6P86452 979 aa25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 CREMQ03060 361 aa25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 TBX2Q13207 712 aaPredicted RBP25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 PDE12Q6L8Q7 609 aaKnown RBP25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 RSPO2Q6UXX9 243 aaPredicted RBP25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 FAM71AQ8IYT1 594 aa25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 SLC4A11Q8NBS3 891 aa25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 SPC24Q8NBT2 197 aa25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 TNIP3Q96KP6 325 aa25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 MYO6Q9UM54 1294 aa25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 PCDHGC5Q9Y5F6 944 aa25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 CDY1Q9Y6F8 540 aa25.14■■□□□ 1.62
TSPAN4-203ENST00000397397 LRRC53A6NM62 1247 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 CYP26A1O43174 497 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 GFPT2O94808 682 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 PTPN1P18031 435 aaKnown RBP25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 ZNF132P52740 706 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 ARPP19P56211 112 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 INTS6LQ5JSJ4 861 aaKnown RBP25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 SMYD5Q6GMV2 418 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 GPIHBP1Q8IV16 184 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 GLYCTKQ8IVS8 523 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 CRYBG2Q8N1P7 616 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 MRPL43Q8N983 215 aaKnown RBP25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 B3GALNT2Q8NCR0 500 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 HEXIM2Q96MH2 286 aaKnown RBP25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 CLSTN3Q9BQT9 956 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 ZCWPW1Q9H0M4 648 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 RXFP1Q9HBX9 757 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 FNIP2Q9P278 1114 aa25.13■■□□□ 1.61
TSPAN4-203ENST00000397397 C2orf71A6NGG8 1288 aa25.12■■□□□ 1.61
TSPAN4-203ENST00000397397 PAEPP09466 180 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms