RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PPEF2O14830 753 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 ZC3H11AO75152 810 aaKnown RBP eCLIP15.9■□□□□ 0.14
CAPN3-207ENST00000397200 LRRN2O75325 713 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 H2AFZP0C0S5 128 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 PNPLA4P41247 253 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 SHHQ15465 462 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 H2AFVQ71UI9 128 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 SLFN11Q7Z7L1 901 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 COLGALT2Q8IYK4 626 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 MMGT1Q8N4V1 131 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 LRRC57Q8N9N7 239 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 RUBCNQ92622 972 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 HPDLQ96IR7 371 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 CAPZA3Q96KX2 299 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 NT5C1BQ96P26 610 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 NRDE2Q9H7Z3 1164 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 CACNG4Q9UBN1 327 aa15.9■□□□□ 0.14
CAPN3-207ENST00000397200 B4GALT3O60512 393 aa15.89■□□□□ 0.13
CAPN3-207ENST00000397200 ASS1P00966 412 aaKnown RBP15.89■□□□□ 0.13
CAPN3-207ENST00000397200 OR1G1P47890 313 aa15.89■□□□□ 0.13
CAPN3-207ENST00000397200 TAF6P49848 677 aa15.89■□□□□ 0.13
CAPN3-207ENST00000397200 NOP14P78316 857 aaKnown RBP15.89■□□□□ 0.13
CAPN3-207ENST00000397200 HTRA4P83105 476 aaPredicted RBP15.89■□□□□ 0.13
CAPN3-207ENST00000397200 UPP1Q16831 310 aa15.89■□□□□ 0.13
CAPN3-207ENST00000397200 XYLT2Q9H1B5 865 aa15.89■□□□□ 0.13
CAPN3-207ENST00000397200 DNAJB4Q9UDY4 337 aa15.89■□□□□ 0.13
CAPN3-207ENST00000397200 INSL6Q9Y581 213 aa15.89■□□□□ 0.13
CAPN3-207ENST00000397200 FOXN3O00409 490 aaPredicted RBP15.88■□□□□ 0.13
CAPN3-207ENST00000397200 NCK2O43639 380 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 TLL1O43897 1013 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 SEC31AO94979 1220 aaKnown RBP15.88■□□□□ 0.13
CAPN3-207ENST00000397200 STAU1O95793 577 aaKnown RBP15.88■□□□□ 0.13
CAPN3-207ENST00000397200 RHOXF2BP0C7M4 288 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 TMEM253P0C7T8 217 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 VSNL1P62760 191 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 SV2CQ496J9 727 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 ZNF667Q5HYK9 610 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 BEND6Q5SZJ8 279 aaPredicted RBP15.88■□□□□ 0.13
CAPN3-207ENST00000397200 SPOUT1Q5T280 376 aaKnown RBP15.88■□□□□ 0.13
CAPN3-207ENST00000397200 SPOPLQ6IQ16 392 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 KRT222Q8N1A0 295 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 ELMO3Q96BJ8 720 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 RAD9AQ99638 391 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 RHOXF2Q9BQY4 288 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 PAAF1Q9BRP4 392 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 TMEM175Q9BSA9 504 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 VRTNQ9H8Y1 702 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 HCSTQ9UBK5 93 aa15.88■□□□□ 0.13
CAPN3-207ENST00000397200 SPDYE4A6NLX3 237 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 B3GAT3O94766 335 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 ALDH2P05091 517 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 P4HA1P13674 534 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 TCEAL1Q15170 157 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 LONRF2Q1L5Z9 754 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 WDR72Q3MJ13 1102 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 DCLRE1AQ6PJP8 1040 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 FAM71AQ8IYT1 594 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 PPM1KQ8N3J5 372 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 TPCN2Q8NHX9 752 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 SHC3Q92529 594 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 ARID3AQ99856 593 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 FUT8Q9BYC5 575 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 UBXN6Q9BZV1 441 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 CWH43Q9H720 699 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 APOBEC3GQ9HC16 384 aaKnown RBP15.87■□□□□ 0.13
CAPN3-207ENST00000397200 UBE2TQ9NPD8 197 aaPredicted RBP15.87■□□□□ 0.13
CAPN3-207ENST00000397200 NXF1Q9UBU9 619 aaKnown RBP15.87■□□□□ 0.13
CAPN3-207ENST00000397200 PRG3Q9Y2Y8 225 aaPredicted RBP15.87■□□□□ 0.13
CAPN3-207ENST00000397200 NUB1Q9Y5A7 615 aa15.87■□□□□ 0.13
CAPN3-207ENST00000397200 KPNA7A9QM74 516 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 MAP2K7O14733 419 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 ERLIN1O75477 346 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 SASH3O75995 380 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 MCM3P25205 808 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 SLC11A1P49279 550 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 GALCP54803 685 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 BCAR1P56945 870 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 LILRA4P59901 499 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 TNNC1P63316 161 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 ARHGAP44Q17R89 818 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 GLYCTKQ8IVS8 523 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 FIBCD1Q8N539 461 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 C3orf58Q8NDZ4 430 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 SPATA4Q8NEY3 305 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 TATDN2Q93075 761 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 FAM81BQ96LP2 452 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 KREMEN1Q96MU8 473 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 COLEC11Q9BWP8 271 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 NIF3L1Q9GZT8 377 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 FAN1Q9Y2M0 1017 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 MRPL42Q9Y6G3 142 aaKnown RBP15.86■□□□□ 0.13
CAPN3-207ENST00000397200 KIAA1671Q9BY89 1806 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 TNRC18O15417 2968 aaPredicted RBP15.86■□□□□ 0.13
CAPN3-207ENST00000397200 NRP1O14786 923 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 KIF4AO95239 1232 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 GALTP07902 379 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 LAG3P18627 525 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 PAX3P23760 479 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 TBXAS1P24557 533 aaPredicted RBP15.86■□□□□ 0.13
CAPN3-207ENST00000397200 BMP8BP34820 402 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms