RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 ANXA13P27216 316 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 MLH1P40692 756 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 ARSEP51690 589 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 CLUL1Q15846 466 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 NBPF20Q3BBV1 942 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 LDLRAD1Q5T700 205 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 OLFML2BQ68BL8 750 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 EFCAB13Q8IY85 973 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 PPP1R14CQ8TAE6 165 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 RBM41Q96IZ5 413 aaKnown RBP16.03■□□□□ 0.16
MCF2L-205ENST00000397017 ARHGAP39Q9C0H5 1083 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 INTUQ9ULD6 942 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 C4BPAP04003 597 aaKnown RBP16.03■□□□□ 0.16
MCF2L-205ENST00000397017 MYBL1P10243 752 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 HSPA6P17066 643 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 CHRNA3P32297 505 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 RTP1P59025 263 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 ITKQ08881 620 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 GLE1Q53GS7 698 aaKnown RBP16.03■□□□□ 0.16
MCF2L-205ENST00000397017 FAXCQ5TGI0 409 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 B3GNT9Q6UX72 402 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 NETO2Q8NC67 525 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 WHAMMQ8TF30 809 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 UBQLN1Q9UMX0 589 aaKnown RBP16.03■□□□□ 0.16
MCF2L-205ENST00000397017 ZC3H11AO75152 810 aaKnown RBP eCLIP16.03■□□□□ 0.16
MCF2L-205ENST00000397017 MCF2P10911 925 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 CCDC130P13994 396 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 FKBP1BP68106 108 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 PTPN18Q99952 460 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 LPIN3Q9BQK8 851 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 CAPS2Q9BXY5 557 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 TUBGCP4Q9UGJ1 667 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 DIS3Q9Y2L1 958 aaKnown RBP16.03■□□□□ 0.16
MCF2L-205ENST00000397017 CDY2AQ9Y6F7 541 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 FAM169AQ9Y6X4 670 aa16.03■□□□□ 0.16
MCF2L-205ENST00000397017 C2CD2LO14523 706 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 CYB561D2O14569 222 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 C22orf31O95567 290 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 TAF6P49848 677 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 ZKSCAN8Q15776 578 aaPredicted RBP16.02■□□□□ 0.16
MCF2L-205ENST00000397017 DEFB115Q30KQ5 88 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 FBXO47Q5MNV8 452 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 ILDR2Q71H61 639 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 RNF180Q86T96 592 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 ANKMY2Q8IV38 441 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 MMGT1Q8N4V1 131 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 ADAM32Q8TC27 787 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 FBXO25Q8TCJ0 367 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 CDHR5Q9HBB8 845 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.02■□□□□ 0.16
MCF2L-205ENST00000397017 L1RE1Q9UN81 338 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 COL11A2P13942 1736 aaPredicted RBP16.02■□□□□ 0.16
MCF2L-205ENST00000397017 NRCAMQ92823 1304 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 ZBTB48P10074 688 aaPredicted RBP16.02■□□□□ 0.16
MCF2L-205ENST00000397017 C12orf56Q8IXR9 622 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 P3H4Q92791 437 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 NR2E1Q9Y466 385 aa16.02■□□□□ 0.16
MCF2L-205ENST00000397017 ASS1P00966 412 aaKnown RBP16.02■□□□□ 0.15
MCF2L-205ENST00000397017 ATP2A2P16615 1042 aaKnown RBP16.02■□□□□ 0.15
MCF2L-205ENST00000397017 JAM2P57087 298 aa16.02■□□□□ 0.15
MCF2L-205ENST00000397017 PRKCZQ05513 592 aa16.02■□□□□ 0.15
MCF2L-205ENST00000397017 CUL1Q13616 776 aa16.02■□□□□ 0.15
MCF2L-205ENST00000397017 FAM131BQ86XD5 332 aa16.02■□□□□ 0.15
MCF2L-205ENST00000397017 C1orf127Q8N9H9 656 aa16.02■□□□□ 0.15
MCF2L-205ENST00000397017 PPP1R12CQ9BZL4 782 aa16.02■□□□□ 0.15
MCF2L-205ENST00000397017 NKIRAS1Q9NYS0 192 aa16.02■□□□□ 0.15
MCF2L-205ENST00000397017 TRIM17Q9Y577 477 aa16.02■□□□□ 0.15
MCF2L-205ENST00000397017 COL2A1P02458 1487 aaPredicted RBP16.02■□□□□ 0.15
MCF2L-205ENST00000397017 ECM29Q5VYK3 1845 aa16.02■□□□□ 0.15
MCF2L-205ENST00000397017 CCDC78A2IDD5 438 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 EBAG9O00559 213 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 RFC1P35251 1148 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-205ENST00000397017 SCNN1GP51170 649 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 RABGGTBP53611 331 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 GABPB1Q06547 395 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-205ENST00000397017 TMED2Q15363 201 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 IZUMO3Q5VZ72 239 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 CCDC13Q8IYE1 715 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 TNIP3Q96KP6 325 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 ST6GALNAC4Q9H4F1 302 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 FNDC3AQ9Y2H6 1198 aaKnown RBP16.01■□□□□ 0.15
MCF2L-205ENST00000397017 PQBP1O60828 265 aaKnown RBP16.01■□□□□ 0.15
MCF2L-205ENST00000397017 SRGAP2BP0DMP2 458 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 SP3Q02447 781 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 PTGISQ16647 500 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 DEFB128Q7Z7B8 93 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 THOC1Q96FV9 657 aaKnown RBP16.01■□□□□ 0.15
MCF2L-205ENST00000397017 ZIM3Q96PE6 472 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 MROH7Q68CQ1 1323 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 E5RJQ4 531 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 CD52P31358 61 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 MBTD1Q05BQ5 628 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 C15orf59Q2T9L4 293 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-205ENST00000397017 ASTE1Q2TB18 679 aaPredicted RBP16.01■□□□□ 0.15
MCF2L-205ENST00000397017 SLITRK6Q9H5Y7 841 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 NUDT5Q9UKK9 219 aa16.01■□□□□ 0.15
MCF2L-205ENST00000397017 H3BQF6 201 aa16■□□□□ 0.15
MCF2L-205ENST00000397017 PODXLO00592 558 aa16■□□□□ 0.15
MCF2L-205ENST00000397017 PHF2O75151 1096 aa16■□□□□ 0.15
MCF2L-205ENST00000397017 VNN1O95497 513 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms