RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 ZFATQ9P243 1243 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 C3orf70A6NLC5 250 aaPredicted RBP17.37■□□□□ 0.37
SCN3B-202ENST00000392770 ANKRD63C9JTQ0 380 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 GZMAP12544 262 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 ATICP31939 592 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 GLIS3Q8NEA6 775 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 E5RI56 91 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 CYB561D2O14569 222 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 PSMD3O43242 534 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 STRNO43815 780 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 MEI1Q5TIA1 1274 aa17.37■□□□□ 0.37
SCN3B-202ENST00000392770 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
SCN3B-202ENST00000392770 NOP9Q86U38 636 aaKnown RBP17.36■□□□□ 0.37
SCN3B-202ENST00000392770 ZIM3Q96PE6 472 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 SNTG2Q9NY99 539 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 AIPL1Q9NZN9 384 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 CHMP2BQ9UQN3 213 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 SPECC1L-ADORA2AF8WAN1 911 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 HIBCHQ6NVY1 386 aaPredicted RBP17.36■□□□□ 0.37
SCN3B-202ENST00000392770 TAS2R42Q7RTR8 314 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 TMEM106CQ9BVX2 250 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 UBIAD1Q9Y5Z9 338 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 MCF2P10911 925 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 CHN1P15882 459 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 CASP5P51878 434 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 PDK1Q15118 436 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 CCNYL1Q8N7R7 359 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 ASAP3Q8TDY4 903 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 RIN2Q8WYP3 895 aaPredicted RBP17.36■□□□□ 0.37
SCN3B-202ENST00000392770 SLC35C1Q96A29 364 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 TMEM176AQ96HP8 235 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 UBA6A0AVT1 1052 aaPredicted RBP17.36■□□□□ 0.37
SCN3B-202ENST00000392770 WNT7AO00755 349 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 PRLRP16471 622 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 NNMTP40261 264 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 MDH1P40925 334 aaKnown RBP17.36■□□□□ 0.37
SCN3B-202ENST00000392770 MAGEA4P43358 317 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 GBP7Q8N8V2 638 aaPredicted RBP17.36■□□□□ 0.37
SCN3B-202ENST00000392770 BAG5Q9UL15 447 aa17.36■□□□□ 0.37
SCN3B-202ENST00000392770 NVLO15381 856 aaKnown RBP17.35■□□□□ 0.37
SCN3B-202ENST00000392770 KLRC4O43908 158 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 ANO4Q32M45 955 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 RNF135Q8IUD6 432 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 MAP4K3Q8IVH8 894 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 ZNF518BQ9C0D4 1074 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 ALG13Q9NP73 1137 aaKnown RBP17.35■□□□□ 0.37
SCN3B-202ENST00000392770 ITGA11Q9UKX5 1188 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 PRG3Q9Y2Y8 225 aaPredicted RBP17.35■□□□□ 0.37
SCN3B-202ENST00000392770 TISP43B9A030 160 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 OPHN1O60890 802 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 FNTAP49354 379 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 OCRLQ01968 901 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 KCNA1Q09470 495 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 BTNL9Q6UXG8 535 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 ACAD11Q709F0 780 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 CCDC60Q8IWA6 550 aaPredicted RBP17.35■□□□□ 0.37
SCN3B-202ENST00000392770 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 DNAJB3Q8WWF6 145 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 CATSPERBQ9H7T0 1116 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 ABI2Q9NYB9 513 aaPredicted RBP17.35■□□□□ 0.37
SCN3B-202ENST00000392770 PSMC3IPQ9P2W1 217 aaPredicted RBP17.35■□□□□ 0.37
SCN3B-202ENST00000392770 KIAA1257Q9ULG3 409 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 ZC3H4Q9UPT8 1303 aaKnown RBP17.35■□□□□ 0.37
SCN3B-202ENST00000392770 GSTA4O15217 222 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 UBA1P22314 1058 aaKnown RBP17.35■□□□□ 0.37
SCN3B-202ENST00000392770 RRM1P23921 792 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 MFSD10Q14728 455 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 SDCCAG3Q96C92 435 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 AP1G2O75843 785 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 ZNF512Q96ME7 567 aaPredicted RBP17.35■□□□□ 0.37
SCN3B-202ENST00000392770 ZNF142P52746 1687 aaPredicted RBP17.35■□□□□ 0.37
SCN3B-202ENST00000392770 MANSC4A6NHS7 340 aaPredicted RBP17.35■□□□□ 0.37
SCN3B-202ENST00000392770 AP3B1O00203 1094 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 YY1P25490 414 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 ADCYAP1R1P41586 468 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 ATG4AQ8WYN0 398 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 FAM96AQ9H5X1 160 aa17.35■□□□□ 0.37
SCN3B-202ENST00000392770 TSR3Q9UJK0 312 aaKnown RBP17.35■□□□□ 0.37
SCN3B-202ENST00000392770 ANKRD65E5RJM6 399 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 M0QYT0 321 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 PRRG1O14668 218 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 LSM8O95777 96 aaKnown RBP17.34■□□□□ 0.37
SCN3B-202ENST00000392770 PPIL6Q8IXY8 311 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 FSCBQ5H9T9 825 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 KCNT1Q5JUK3 1230 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 AGBL2Q5U5Z8 902 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 TNFRSF25Q93038 417 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 SENP1Q9P0U3 644 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 RBP3P10745 1247 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 ARFIP2P53365 341 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 E2F5Q15329 346 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 ASIC4Q96FT7 647 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 IRF6O14896 467 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 ZNF200P98182 395 aaPredicted RBP17.34■□□□□ 0.37
SCN3B-202ENST00000392770 TLK2Q86UE8 772 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 VSIG10LQ86VR7 867 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 CDC26Q8NHZ8 85 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 ACTRT1Q8TDG2 376 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 L3MBTL3Q96JM7 780 aaPredicted RBP17.34■□□□□ 0.37
SCN3B-202ENST00000392770 SERPINI1Q99574 410 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms