RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 INTS6LQ5JSJ4 861 aaKnown RBP13.59□□□□□ -0.23
GGPS1-203ENST00000391855 LIMS2Q7Z4I7 341 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 FGF13Q92913 245 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 FAM84AQ96KN4 292 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 TMEM209Q96SK2 561 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 CORO1BQ9BR76 489 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 KCNK12Q9HB15 430 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 ABCB6Q9NP58 842 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 HCFC1R1Q9NWW0 138 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 DUSP12Q9UNI6 340 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 PCDHB5Q9Y5E4 795 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 DOCK8Q8NF50 2099 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 TMEM221A6NGB7 291 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 ANHXE9PGG2 379 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 M0R296 226 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 CETN3O15182 167 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 TACC1O75410 805 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 ASGR2P07307 311 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 WARSP23381 471 aaKnown RBP13.58□□□□□ -0.24
GGPS1-203ENST00000391855 CASP4P49662 377 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 ADAM9Q13443 819 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 MAPRE1Q15691 268 aaKnown RBP13.58□□□□□ -0.24
GGPS1-203ENST00000391855 SOWAHAQ2M3V2 549 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 MGAT5BQ3V5L5 792 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 ZACNQ401N2 412 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 PRSS36Q5K4E3 855 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 NPAS3Q8IXF0 933 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 FAM186BQ8IYM0 893 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 ATAD1Q8NBU5 361 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 PLEKHO2Q8TD55 490 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 ZNF516Q92618 1163 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 TAF4BQ92750 862 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 FUBP3Q96I24 572 aaKnown RBP eCLIP13.58□□□□□ -0.24
GGPS1-203ENST00000391855 SEPT5Q99719 369 aaPredicted RBP13.58□□□□□ -0.24
GGPS1-203ENST00000391855 CEP72Q9P209 647 aa13.58□□□□□ -0.24
GGPS1-203ENST00000391855 FAM86C2PA6NEL3 165 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 PSMA7O14818 248 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 GADD45BO75293 160 aaPredicted RBP13.57□□□□□ -0.24
GGPS1-203ENST00000391855 CST3P01034 146 aaPredicted RBP13.57□□□□□ -0.24
GGPS1-203ENST00000391855 C4BPAP04003 597 aaKnown RBP13.57□□□□□ -0.24
GGPS1-203ENST00000391855 EPB41P11171 864 aaKnown RBP13.57□□□□□ -0.24
GGPS1-203ENST00000391855 P4HA1P13674 534 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 PRCPP42785 496 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 VAMP7P51809 220 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 LRRC63Q05C16 580 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 HTR4Q13639 388 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 NCOA4Q13772 614 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 ZNF699Q32M78 642 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 WDR72Q3MJ13 1102 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 ZNF667Q5HYK9 610 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 TDRD10Q5VZ19 366 aaKnown RBP13.57□□□□□ -0.24
GGPS1-203ENST00000391855 FOXR2Q6PJQ5 311 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 C4orf50Q6ZRC1 276 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 OSTM1Q86WC4 334 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 SMYD4Q8IYR2 804 aaPredicted RBP13.57□□□□□ -0.24
GGPS1-203ENST00000391855 ITFG1Q8TB96 612 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 PSMG2Q969U7 264 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 MMS19Q96T76 1030 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 SYT15Q9BQS2 421 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 GPR88Q9GZN0 384 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 CRISPLD1Q9H336 500 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 CDH9Q9ULB4 789 aa13.57□□□□□ -0.24
GGPS1-203ENST00000391855 SLC16A3O15427 465 aaKnown RBP13.56□□□□□ -0.24
GGPS1-203ENST00000391855 STX10O60499 249 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 AKAP3O75969 853 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 HAPLN1P10915 354 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-203ENST00000391855 MYL6P60660 151 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 RPL10AP62906 217 aaKnown RBP13.56□□□□□ -0.24
GGPS1-203ENST00000391855 FKBP3Q00688 224 aaKnown RBP13.56□□□□□ -0.24
GGPS1-203ENST00000391855 SLC5A9Q2M3M2 681 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 SGSM1Q2NKQ1 1148 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 CFAP221Q4G0U5 840 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 LRRTM3Q86VH5 581 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 ADSSL1Q8N142 457 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 FAM200AQ8TCP9 573 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 KBTBD7Q8WVZ9 684 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 DHTKD1Q96HY7 919 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-203ENST00000391855 PKMYT1Q99640 499 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 IMPG2Q9BZV3 1241 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 XYLT2Q9H1B5 865 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 DNAJC25Q9H1X3 360 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 SNX25Q9H3E2 840 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 ABI2Q9NYB9 513 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-203ENST00000391855 ZMYM5Q9UJ78 669 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 SLC27A5Q9Y2P5 690 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 CLSTN1O94985 981 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 SRFP11831 508 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 MYL4P12829 197 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 CEBPBP17676 345 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 GTF2H1P32780 548 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 MCCD1P59942 119 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-203ENST00000391855 SCARA3Q6AZY7 606 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 SV2AQ7L0J3 742 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 TMC8Q8IU68 726 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 SPATA2LQ8IUW3 424 aaPredicted RBP13.56□□□□□ -0.24
GGPS1-203ENST00000391855 SUGP1Q8IWZ8 645 aaKnown RBP13.56□□□□□ -0.24
GGPS1-203ENST00000391855 ZC3H3Q8IXZ2 948 aaKnown RBP13.56□□□□□ -0.24
GGPS1-203ENST00000391855 TTC9BQ8N6N2 239 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 TRIML1Q8N9V2 468 aa13.56□□□□□ -0.24
GGPS1-203ENST00000391855 CCDC150Q8NCX0 1101 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms