RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ABRAQ8N0Z2 381 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 HHATLQ9HCP6 504 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF229Q9UJW7 825 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 HAUS5O94927 633 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 CAPZA2P47755 286 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 VCPP55072 806 aaKnown RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 USP17L2Q6R6M4 530 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 SGK1O00141 431 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ARHGEF15O94989 841 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 N4BP2L2Q92802 583 aaPredicted RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 NPHP4O75161 1426 aaPredicted RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 PPP4R4Q6NUP7 873 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 INTS2Q9H0H0 1204 aaKnown RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 HBP1O60381 514 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 PHF13Q86YI8 300 aaPredicted RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 DDHD1Q8NEL9 900 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 BTBD7Q9P203 1132 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ZC3H7BQ9UGR2 993 aaKnown RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 LYPLAL1Q5VWZ2 237 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 SIAEQ9HAT2 523 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 KANSL3Q9P2N6 904 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 LNPEPQ9UIQ6 1025 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ZMYM5Q9UJ78 669 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 NBPF26B4DH59 902 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ANXA6P08133 673 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 IREB2P48200 963 aaKnown RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 PRIM2P49643 509 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 MESDQ14696 234 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 DARS2Q6PI48 645 aaKnown RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 NBPF15Q8N660 670 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ARHGEF3Q9NR81 526 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 KRT8P05787 483 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 PPP6R3Q5H9R7 873 aaPredicted RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 CCDC33Q8N5R6 958 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 C19orf43Q9BQ61 176 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 CDH19Q9H159 772 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 GLI2P10070 1586 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 SEC31AO94979 1220 aaKnown RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 HIRAP54198 1017 aaPredicted RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 THEM5Q8N1Q8 247 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 SIGLEC16A6NMB1 481 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 CYP11B1P15538 503 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF772Q68DY9 489 aaPredicted RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 RASSF3Q86WH2 238 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ORAI2Q96SN7 254 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 AGPAT3Q9NRZ7 376 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ARIH1Q9Y4X5 557 aaPredicted RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 CCNHP51946 323 aaPredicted RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 EIF6P56537 245 aaKnown RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 FUT2Q10981 343 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 WASHC5Q12768 1159 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ZFPM1Q8IX07 1006 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 NAF1Q96HR8 494 aaKnown RBP5.16□□□□□ -1.58
PCDH9-201ENST00000377861 LRRC4Q9HBW1 653 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 TUBA3CQ13748 450 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 MTX3Q5HYI7 312 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF484Q5JVG2 852 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 TFCP2L1Q9NZI6 479 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 NUB1Q9Y5A7 615 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 A0A1W2PQ67 120 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 FAM155BO75949 473 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 NT5DC3Q86UY8 548 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 VGLL2Q8N8G2 317 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 NIPA2Q8N8Q9 360 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 LRMDAQ9H2I8 198 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 COPG2Q9UBF2 871 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 TBK1Q9UHD2 729 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 ERCC2P18074 760 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 MAPK8P45983 427 aa5.16□□□□□ -1.58
PCDH9-201ENST00000377861 AFF2P51816 1311 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 TMEM247A6NEH6 219 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 POTEMA6NI47 508 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 DIAPH2O60879 1101 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 NQO1P15559 274 aaKnown RBP5.15□□□□□ -1.58
PCDH9-201ENST00000377861 POTEHQ6S545 545 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 POTEGQ6S5H5 508 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 NUDT18Q6ZVK8 323 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 MBOAT7Q96N66 472 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 RMDN3Q96TC7 470 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 CHP1Q99653 195 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 COMMD10Q9Y6G5 202 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 USP17L8P0C7I0 530 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 DCAF4L1Q3SXM0 396 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 NOP9Q86U38 636 aaKnown RBP5.15□□□□□ -1.58
PCDH9-201ENST00000377861 GIT2Q14161 759 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 RWDD4Q6NW29 188 aaKnown RBP5.15□□□□□ -1.58
PCDH9-201ENST00000377861 PLD6Q8N2A8 252 aaKnown RBP5.15□□□□□ -1.58
PCDH9-201ENST00000377861 VPS33AQ96AX1 596 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 OSBPP22059 807 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 TMEM119Q4V9L6 283 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 CATSPER3Q86XQ3 398 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 OTUB1Q96FW1 271 aaPredicted RBP5.15□□□□□ -1.58
PCDH9-201ENST00000377861 CCNB1IP1Q9NPC3 277 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 PIH1D3Q9NQM4 214 aaKnown RBP5.15□□□□□ -1.58
PCDH9-201ENST00000377861 DDX20Q9UHI6 824 aaKnown RBP5.15□□□□□ -1.58
PCDH9-201ENST00000377861 NOVP48745 357 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 IFRD2Q12894 506 aaPredicted RBP5.15□□□□□ -1.58
PCDH9-201ENST00000377861 DMAC2Q9NW81 257 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 FESP07332 822 aa5.15□□□□□ -1.58
PCDH9-201ENST00000377861 SERPINA6P08185 405 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms