RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 OTUD4Q01804 1114 aaKnown RBP11.72□□□□□ -0.53
HDAC6-203ENST00000376619 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 LRRC34Q8IZ02 419 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 ACTRT1Q8TDG2 376 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 C7orf43Q8WVR3 580 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 RAPGEF5Q92565 580 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 LPIN3Q9BQK8 851 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 SHCBP1LQ9BZQ2 653 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 GOLGA2P5Q9HBQ8 144 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 AFG3L2Q9Y4W6 797 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 NR2E3Q9Y5X4 410 aa11.72□□□□□ -0.53
HDAC6-203ENST00000376619 LACTBL1A8MY62 500 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 ADCY3O60266 1144 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 SUN1O94901 812 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 MAGEA4P43358 317 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 DHX34Q14147 1143 aaKnown RBP11.71□□□□□ -0.53
HDAC6-203ENST00000376619 CLEC16AQ2KHT3 1053 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 NXNQ6DKJ4 435 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 FASTKD5Q7L8L6 764 aaKnown RBP11.71□□□□□ -0.53
HDAC6-203ENST00000376619 L3MBTL3Q96JM7 780 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-203ENST00000376619 CFAP57Q96MR6 1250 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 MMRN1Q13201 1228 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 SEPT6Q14141 434 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 HIF1AQ16665 826 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 RAPH1Q70E73 1250 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 PCGF5Q86SE9 256 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 NDRG1Q92597 394 aaKnown RBP11.71□□□□□ -0.53
HDAC6-203ENST00000376619 CHMP6Q96FZ7 201 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 PABPC3Q9H361 631 aaKnown RBP11.71□□□□□ -0.53
HDAC6-203ENST00000376619 C12orf65Q9H3J6 166 aaKnown RBP11.71□□□□□ -0.53
HDAC6-203ENST00000376619 HAUS2Q9NVX0 235 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 UBP1Q9NZI7 540 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 CNTNAP1P78357 1384 aa11.71□□□□□ -0.53
HDAC6-203ENST00000376619 FAM187AA6NFU0 413 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 ARHGAP42A6NI28 874 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 HMBSP08397 361 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 MAPTP10636 758 aaKnown RBP11.71□□□□□ -0.54
HDAC6-203ENST00000376619 PHBP35232 272 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 HTRA3P83110 453 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 JADE1Q6IE81 842 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 C11orf63Q6NUN7 778 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 DENND1BQ6P3S1 775 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 NPNTQ6UXI9 565 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 TMC3Q7Z5M5 1100 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 SLC5A4Q9NY91 659 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 GTPBP10A4D1E9 387 aaKnown RBP11.71□□□□□ -0.54
HDAC6-203ENST00000376619 AGPSO00116 658 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 BAG2O95816 211 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 TCF4P15884 667 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 CHKAP35790 457 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 PRKCIP41743 596 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 ZRSR2Q15696 482 aaKnown RBP11.71□□□□□ -0.54
HDAC6-203ENST00000376619 GOLGA7BQ2TAP0 167 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 ABRAQ8N0Z2 381 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 MYCBPAPQ8TBZ2 947 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 SCYL1Q96KG9 808 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 FAM81BQ96LP2 452 aa11.71□□□□□ -0.54
HDAC6-203ENST00000376619 A0A087WUV0 522 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-203ENST00000376619 SCAMP3O14828 347 aaKnown RBP11.7□□□□□ -0.54
HDAC6-203ENST00000376619 HBP1O60381 514 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 CREB1P16220 341 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 KCNA2P16389 499 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 ABCG1P45844 678 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 NDST1P52848 882 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 EIF3BP55884 814 aaKnown RBP11.7□□□□□ -0.54
HDAC6-203ENST00000376619 PTENP60484 403 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 ENOSF1Q7L5Y1 443 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 PID1Q7Z2X4 250 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 RYBPQ8N488 228 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-203ENST00000376619 FAM136AQ96C01 138 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 HVCN1Q96D96 273 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 B3GNT5Q9BYG0 378 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 C2orf40Q9H1Z8 148 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 EPN3Q9H201 632 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 PRG3Q9Y2Y8 225 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-203ENST00000376619 SHANK3Q9BYB0 1731 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-203ENST00000376619 USP2O75604 605 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-203ENST00000376619 GH1P01241 217 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 RFX1P22670 979 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 PTGISQ16647 500 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 ASTE1Q2TB18 679 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-203ENST00000376619 FAM71AQ8IYT1 594 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 SHC3Q92529 594 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 CALR3Q96L12 384 aaKnown RBP11.7□□□□□ -0.54
HDAC6-203ENST00000376619 GCOM2Q9BZD3 368 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-203ENST00000376619 VPS11Q9H270 941 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 TXNRD2Q9NNW7 524 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 DPP3Q9NY33 737 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 KLHL8Q9P2G9 620 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-203ENST00000376619 NUP188Q5SRE5 1749 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 GARTP22102 1010 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 LMNB2Q03252 620 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 CES3Q6UWW8 571 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 EXT2Q93063 718 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 XPO6Q96QU8 1125 aaKnown RBP11.7□□□□□ -0.54
HDAC6-203ENST00000376619 GMLQ99445 158 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 KIF9Q9HAQ2 790 aa11.7□□□□□ -0.54
HDAC6-203ENST00000376619 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.7□□□□□ -0.54
HDAC6-203ENST00000376619 ASNSD1Q9NWL6 643 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms