RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 GBP1P32455 592 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 SSR1P43307 286 aaKnown RBP14.79□□□□□ -0.04
MSH5-202ENST00000375740 SLC8A3P57103 927 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 PPP1R2P3Q6NXS1 205 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 TAPT1Q6NXT6 567 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 SCARA5Q6ZMJ2 495 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 RHOT1Q8IXI2 618 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 ARMC2Q8NEN0 867 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 GPRC5AQ8NFJ5 357 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 ATG4AQ8WYN0 398 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 HEMGNQ9BXL5 484 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 XYLT2Q9H1B5 865 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 CDT1Q9H211 546 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 PABPC3Q9H361 631 aaKnown RBP14.79□□□□□ -0.04
MSH5-202ENST00000375740 MGAMO43451 1857 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 KIF3CO14782 793 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 B4GALT4O60513 344 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 TNNC2P02585 160 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 RPL7AP62424 266 aaKnown RBP14.79□□□□□ -0.04
MSH5-202ENST00000375740 ZNF699Q32M78 642 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 AGAP11Q8TF27 550 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 ART4Q93070 314 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 ZNF570Q96NI8 536 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 KDM4CQ9H3R0 1056 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 MTRF1LQ9UGC7 380 aaKnown RBP14.79□□□□□ -0.04
MSH5-202ENST00000375740 TNFSF13BQ9Y275 285 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 CCT8L1PA6NM43 557 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 GPR25O00155 361 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 SHBGP04278 402 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 LGALS2P05162 132 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 CXCL8P10145 99 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 RALAP11233 206 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 LAMC2Q13753 1193 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 ZKSCAN8Q15776 578 aaPredicted RBP14.78□□□□□ -0.04
MSH5-202ENST00000375740 ZNF792Q3KQV3 632 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 KRT71Q3SY84 523 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 ZNF484Q5JVG2 852 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 AGBL2Q5U5Z8 902 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 MAIP1Q8WWC4 291 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 TFAP2BQ92481 460 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 RNF25Q96BH1 459 aaPredicted RBP14.78□□□□□ -0.04
MSH5-202ENST00000375740 ANKRD36BP1Q96IX9 119 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 PPP1R16BQ96T49 567 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 IFT122Q9HBG6 1241 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 NXF1Q9UBU9 619 aaKnown RBP14.78□□□□□ -0.04
MSH5-202ENST00000375740 GGT7Q9UJ14 662 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 POLIQ9UNA4 740 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 R3HDM2Q9Y2K5 976 aaKnown RBP14.78□□□□□ -0.04
MSH5-202ENST00000375740 ANK1P16157 1881 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 PSTPIP1O43586 416 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 GJC1P36383 396 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 ASPAP45381 313 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 KRT17Q04695 432 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 FAM133BQ5BKY9 247 aaKnown RBP14.78□□□□□ -0.04
MSH5-202ENST00000375740 MAMDC4Q6UXC1 1216 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 TMEM130Q8N3G9 435 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 WDTC1Q8N5D0 677 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 C3orf20Q8ND61 904 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 SLCO2A1Q92959 643 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 DCLK3Q9C098 648 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 SEMA4AQ9H3S1 761 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 RPF1Q9H9Y2 349 aaKnown RBP14.78□□□□□ -0.04
MSH5-202ENST00000375740 IP6K2Q9UHH9 426 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 PNMA3Q9UL41 463 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 AGAP1Q9UPQ3 857 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 C15orf41Q9Y2V0 281 aa14.78□□□□□ -0.04
MSH5-202ENST00000375740 A0A087WZ62 844 aa14.77□□□□□ -0.04
MSH5-202ENST00000375740 TMEM191CA6NGB0 347 aa14.77□□□□□ -0.04
MSH5-202ENST00000375740 KRT19P08727 400 aa14.77□□□□□ -0.04
MSH5-202ENST00000375740 ADORA2AP29274 412 aa14.77□□□□□ -0.04
MSH5-202ENST00000375740 EIF3BP55884 814 aaKnown RBP14.77□□□□□ -0.04
MSH5-202ENST00000375740 KATNAL2Q8IYT4 538 aa14.77□□□□□ -0.04
MSH5-202ENST00000375740 CCDC63Q8NA47 563 aa14.77□□□□□ -0.04
MSH5-202ENST00000375740 TMEM35BQ8NCS4 154 aa14.77□□□□□ -0.04
MSH5-202ENST00000375740 FDXACB1Q9BRP7 624 aaPredicted RBP14.77□□□□□ -0.04
MSH5-202ENST00000375740 LSM8O95777 96 aaKnown RBP14.77□□□□□ -0.05
MSH5-202ENST00000375740 PAEPP09466 180 aa14.77□□□□□ -0.05
MSH5-202ENST00000375740 SLC29A2Q14542 456 aa14.77□□□□□ -0.05
MSH5-202ENST00000375740 UBAP2Q5T6F2 1119 aaKnown RBP14.77□□□□□ -0.05
MSH5-202ENST00000375740 ANKS1BQ7Z6G8 1248 aa14.77□□□□□ -0.05
MSH5-202ENST00000375740 PRCCQ92733 491 aaPredicted RBP14.77□□□□□ -0.05
MSH5-202ENST00000375740 PRMT7Q9NVM4 692 aaPredicted RBP14.77□□□□□ -0.05
MSH5-202ENST00000375740 TCRBV5S1A1TA0A578 114 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 PDHXO00330 501 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 DIAPH2O60879 1101 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 GH1P01241 217 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 CALB1P05937 261 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 NUDT17P0C025 328 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 GHRP10912 638 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 PHKA2P46019 1235 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 KCNJ2P63252 427 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 KLF1Q13351 362 aaPredicted RBP14.76□□□□□ -0.05
MSH5-202ENST00000375740 ATP13A4Q4VNC1 1196 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 DENND2CQ68D51 928 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 AFG1LQ8WV93 481 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 NFKBIZQ9BYH8 718 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 ZNF408Q9H9D4 720 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 LACTBL1A8MY62 500 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 IL18RAPO95256 599 aa14.76□□□□□ -0.05
MSH5-202ENST00000375740 NFICP08651 508 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms