RNA–Protein interactions for RNA: ENST00000373995.7

A1CF-203, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 2,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-203ENST00000373995 DUOXA2Q1HG44 320 aa13.26□□□□□ -0.29
A1CF-203ENST00000373995 PAN2Q504Q3 1202 aaKnown RBP13.26□□□□□ -0.29
A1CF-203ENST00000373995 LMBRD2Q68DH5 695 aaPredicted RBP13.26□□□□□ -0.29
A1CF-203ENST00000373995 GBP6Q6ZN66 633 aa13.26□□□□□ -0.29
A1CF-203ENST00000373995 APTXQ7Z2E3 356 aaKnown RBP13.26□□□□□ -0.29
A1CF-203ENST00000373995 COLGALT2Q8IYK4 626 aa13.26□□□□□ -0.29
A1CF-203ENST00000373995 EXOC4Q96A65 974 aa13.26□□□□□ -0.29
A1CF-203ENST00000373995 SH3GL1Q99961 368 aa13.26□□□□□ -0.29
A1CF-203ENST00000373995 MTMR12Q9C0I1 747 aa13.26□□□□□ -0.29
A1CF-203ENST00000373995 CWH43Q9H720 699 aa13.26□□□□□ -0.29
A1CF-203ENST00000373995 HOMER3Q9NSC5 361 aa13.26□□□□□ -0.29
A1CF-203ENST00000373995 OPA1O60313 960 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 C4BPAP04003 597 aaKnown RBP13.25□□□□□ -0.29
A1CF-203ENST00000373995 RRM1P23921 792 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 LRPAP1P30533 357 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 GTF2H1P32780 548 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 AP3M2P53677 418 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 TFAMQ00059 246 aaKnown RBP13.25□□□□□ -0.29
A1CF-203ENST00000373995 ZACNQ401N2 412 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 PRPF38BQ5VTL8 546 aaKnown RBP13.25□□□□□ -0.29
A1CF-203ENST00000373995 DPH6Q7L8W6 267 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 C1orf127Q8N9H9 656 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 CLP1Q92989 425 aaKnown RBP13.25□□□□□ -0.29
A1CF-203ENST00000373995 CAPS2Q9BXY5 557 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 NRDE2Q9H7Z3 1164 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 PCDHA11Q9Y5I1 949 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 MRPL42Q9Y6G3 142 aaKnown RBP13.25□□□□□ -0.29
A1CF-203ENST00000373995 TDRD15B5MCY1 1934 aaKnown RBP13.25□□□□□ -0.29
A1CF-203ENST00000373995 RNASELQ05823 741 aaKnown RBP13.25□□□□□ -0.29
A1CF-203ENST00000373995 PDAP1Q13442 181 aaKnown RBP13.25□□□□□ -0.29
A1CF-203ENST00000373995 DCAF17Q5H9S7 520 aaPredicted RBP13.25□□□□□ -0.29
A1CF-203ENST00000373995 MIIPQ5JXC2 388 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 TDRD10Q5VZ19 366 aaKnown RBP13.25□□□□□ -0.29
A1CF-203ENST00000373995 SV2AQ7L0J3 742 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 TMEM130Q8N3G9 435 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 USP33Q8TEY7 942 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 CACTINQ8WUQ7 758 aaKnown RBP13.25□□□□□ -0.29
A1CF-203ENST00000373995 PAAF1Q9BRP4 392 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 TUBGCP2Q9BSJ2 902 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 PBX4Q9BYU1 374 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 GOLGA2P5Q9HBQ8 144 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 DCAF16Q9NXF7 216 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 DNAJB4Q9UDY4 337 aa13.25□□□□□ -0.29
A1CF-203ENST00000373995 LIMA1Q9UHB6 759 aaKnown RBP13.25□□□□□ -0.29
A1CF-203ENST00000373995 ANO9A1A5B4 782 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 GOLGA6L19H0YKK7 550 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 PMM2O15305 246 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 XPOTO43592 962 aaKnown RBP13.24□□□□□ -0.29
A1CF-203ENST00000373995 MYOGP15173 224 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 GCLMP48507 274 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 GUCY2FP51841 1108 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 KRT31Q15323 416 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 UPP1Q16831 310 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 CBWD6Q4V339 395 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 CBWD3Q5JTY5 395 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 CBWD5Q5RIA9 395 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 SCARA3Q6AZY7 606 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 TRAPPC11Q7Z392 1133 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 BEST2Q8NFU1 509 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 FAM81AQ8TBF8 368 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 TMEM175Q9BSA9 504 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 TMEM8AQ9HCN3 771 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 DPP3Q9NY33 737 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 SFMBT1Q9UHJ3 866 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 SIX4Q9UIU6 781 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 COLQQ9Y215 455 aaPredicted RBP13.24□□□□□ -0.29
A1CF-203ENST00000373995 STX10O60499 249 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 KIAA0754O94854 1291 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 TMEM191BP0C7N4 346 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 TRIM21P19474 475 aaKnown RBP13.24□□□□□ -0.29
A1CF-203ENST00000373995 RPL9P32969 192 aaKnown RBP13.24□□□□□ -0.29
A1CF-203ENST00000373995 CLCNKBP51801 687 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 KCNH2Q12809 1159 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 MAN2A1Q16706 1144 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 TCERG1LQ5VWI1 586 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 FIBCD1Q8N539 461 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 ANKRD36BP1Q96IX9 119 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 UROC1Q96N76 676 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 CACNG4Q9UBN1 327 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 ITGA11Q9UKX5 1188 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 G3BP2Q9UN86 482 aaKnown RBP13.24□□□□□ -0.29
A1CF-203ENST00000373995 WDR37Q9Y2I8 494 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 YBX2Q9Y2T7 364 aaKnown RBP13.24□□□□□ -0.29
A1CF-203ENST00000373995 COQ4Q9Y3A0 265 aa13.24□□□□□ -0.29
A1CF-203ENST00000373995 LINC01553A4QN01 128 aa13.23□□□□□ -0.29
A1CF-203ENST00000373995 CASTOR2A6NHX0 329 aa13.23□□□□□ -0.29
A1CF-203ENST00000373995 PIRO00625 290 aa13.23□□□□□ -0.29
A1CF-203ENST00000373995 ARHGEF15O94989 841 aa13.23□□□□□ -0.29
A1CF-203ENST00000373995 PBX2P40425 430 aa13.23□□□□□ -0.29
A1CF-203ENST00000373995 MTIF2P46199 727 aaKnown RBP13.23□□□□□ -0.29
A1CF-203ENST00000373995 FMO5P49326 533 aa13.23□□□□□ -0.29
A1CF-203ENST00000373995 MXI1P50539 228 aa13.23□□□□□ -0.29
A1CF-203ENST00000373995 LRIT3Q3SXY7 679 aa13.23□□□□□ -0.29
A1CF-203ENST00000373995 C9orf57Q5W0N0 161 aa13.23□□□□□ -0.29
A1CF-203ENST00000373995 KRT39Q6A163 491 aa13.23□□□□□ -0.29
A1CF-203ENST00000373995 ZCCHC8Q6NZY4 707 aaKnown RBP13.23□□□□□ -0.29
A1CF-203ENST00000373995 RELL1Q8IUW5 271 aa13.23□□□□□ -0.29
A1CF-203ENST00000373995 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
A1CF-203ENST00000373995 DDX27Q96GQ7 796 aaKnown RBP13.23□□□□□ -0.29
A1CF-203ENST00000373995 MCM8Q9UJA3 840 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms