RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 PDE6CP51160 858 aa15.59■□□□□ 0.09
SMPDL3B-201ENST00000373888 RABGGTBP53611 331 aa15.59■□□□□ 0.09
SMPDL3B-201ENST00000373888 MAPK8IP2Q13387 824 aaPredicted RBP15.59■□□□□ 0.09
SMPDL3B-201ENST00000373888 ZNF394Q53GI3 561 aa15.59■□□□□ 0.09
SMPDL3B-201ENST00000373888 TDRD12Q587J7 1177 aaKnown RBP15.59■□□□□ 0.09
SMPDL3B-201ENST00000373888 METTL23Q86XA0 190 aa15.59■□□□□ 0.09
SMPDL3B-201ENST00000373888 TMEM169Q96HH4 297 aa15.59■□□□□ 0.09
SMPDL3B-201ENST00000373888 C16orf45Q96MC5 204 aaPredicted RBP15.59■□□□□ 0.09
SMPDL3B-201ENST00000373888 CHP1Q99653 195 aa15.59■□□□□ 0.09
SMPDL3B-201ENST00000373888 SYT11Q9BT88 431 aa15.59■□□□□ 0.09
SMPDL3B-201ENST00000373888 ACP6Q9NPH0 428 aa15.59■□□□□ 0.09
SMPDL3B-201ENST00000373888 PCDHB12Q9Y5F1 795 aa15.59■□□□□ 0.09
SMPDL3B-201ENST00000373888 LINC01553A4QN01 128 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 GRXCR1A8MXD5 290 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 A8MXQ7 604 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 OAZ2O95190 189 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 PLEKP08567 350 aaPredicted RBP15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 LMO2P25791 158 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 GNA15P30679 374 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 FAM171A1Q5VUB5 890 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 OVOS1Q6IE37 1185 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 NOP9Q86U38 636 aaKnown RBP15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 ZNF677Q86XU0 584 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 CRYBG2Q8N1P7 616 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 DDX1Q92499 740 aaKnown RBP15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 PPP1R13BQ96KQ4 1090 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 RTP3Q9BQQ7 232 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 VN1R3Q9BXE9 311 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 DNAI2Q9GZS0 605 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 DDX43Q9NXZ2 648 aaKnown RBP15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 BCCIPQ9P287 314 aaKnown RBP eCLIP15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 STK39Q9UEW8 545 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 KIAA1257Q9ULG3 409 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 RWDD3Q9Y3V2 267 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 PCDHA11Q9Y5I1 949 aa15.58■□□□□ 0.09
SMPDL3B-201ENST00000373888 TNRC18O15417 2968 aaPredicted RBP15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 HCRTO43612 131 aa15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 ANXA13P27216 316 aa15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 PCSK1P29120 753 aa15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 CDR2Q01850 454 aa15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 YWHAHQ04917 246 aaPredicted RBP15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 ORC1Q13415 861 aa15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 MRPL58Q14197 206 aaKnown RBP15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 ASTE1Q2TB18 679 aaPredicted RBP15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 ZNF571Q7Z3V5 609 aaPredicted RBP15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 DDX53Q86TM3 631 aaKnown RBP15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 OLIG1Q8TAK6 271 aa15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 TNIP3Q96KP6 325 aa15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 ACBD6Q9BR61 282 aa15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 TTPALQ9BTX7 342 aa15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 DPEP3Q9H4B8 488 aa15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 NHEJ1Q9H9Q4 299 aaPredicted RBP15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 CHST7Q9NS84 486 aa15.58■□□□□ 0.08
SMPDL3B-201ENST00000373888 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 SOWAHDA6NJG2 315 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 SOD2P04179 222 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 PDGFRBP09619 1106 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 VDRP11473 427 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 MYOGP15173 224 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 BMPR1AP36894 532 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 EIF4A3P38919 411 aaKnown RBP15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 PLCB3Q01970 1234 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 USP41Q3LFD5 358 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 VARS2Q5ST30 1063 aaKnown RBP15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 TAS1R1Q7RTX1 841 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 ACOT1Q86TX2 421 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 CCDC170Q8IYT3 715 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 TDHQ8IZJ6 230 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 THEM5Q8N1Q8 247 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 SLC20A1Q8WUM9 679 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 ZNF606Q8WXB4 792 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 TFAP2BQ92481 460 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 AGPAT1Q99943 283 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 ZSWIM1Q9BR11 485 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 HERC2P3Q9BVR0 1158 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 PLVAPQ9BX97 442 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 CDH9Q9ULB4 789 aa15.57■□□□□ 0.08
SMPDL3B-201ENST00000373888 VWA8A3KMH1 1905 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 USP27XA6NNY8 438 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 THAP12O43422 761 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 FGF18O76093 207 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 CALCAP01258 141 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 CA3P07451 260 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 CD19P15391 556 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 CHRNB2P17787 502 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 BMS1Q14692 1282 aaKnown RBP15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 SGO2Q562F6 1265 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 RTP2Q5QGT7 225 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 KIAA0319Q5VV43 1072 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 VPS36Q86VN1 386 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 CEP57Q86XR8 500 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 B3GALNT2Q8NCR0 500 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 MYRIPQ8NFW9 859 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 KIF18AQ8NI77 898 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 CCDC42Q96M95 316 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 HEXIM2Q96MH2 286 aaKnown RBP15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 SYT15Q9BQS2 421 aa15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 TRMT1Q9NXH9 659 aaKnown RBP15.56■□□□□ 0.08
SMPDL3B-201ENST00000373888 PUF60Q9UHX1 559 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms