RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ATF4P18848 351 aaPredicted RBP15.88■□□□□ 0.13
COL5A1-201ENST00000371817 SCRN3Q0VDG4 424 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 SLC25A24Q6NUK1 477 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 KLHL32Q96NJ5 620 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 GCNAQ96QF7 691 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 TRAPPC8Q9Y2L5 1435 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 E9PBE3 544 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 PSMD3O43242 534 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 FNTAP49354 379 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 MTDHQ86UE4 582 aaKnown RBP15.88■□□□□ 0.13
COL5A1-201ENST00000371817 S100ZQ8WXG8 99 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 SHCBP1LQ9BZQ2 653 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 MMADHCQ9H3L0 296 aaPredicted RBP15.88■□□□□ 0.13
COL5A1-201ENST00000371817 CCND2P30279 289 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 CYP51A1Q16850 503 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 CACTIN-AS1Q8N1I8 211 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 CHP1Q99653 195 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 ADCY6O43306 1168 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 PSAPP07602 524 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 FUT11Q495W5 492 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 TUBA3EQ6PEY2 450 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 ZNF589Q86UQ0 364 aaPredicted RBP15.88■□□□□ 0.13
COL5A1-201ENST00000371817 DGKHQ86XP1 1220 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 OR6B3Q8NGW1 331 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 PPP1R2P1Q96PQ5 205 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 DHX35Q9H5Z1 703 aaKnown RBP15.88■□□□□ 0.13
COL5A1-201ENST00000371817 TMCC3Q9ULS5 477 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 TPRKBQ9Y3C4 175 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 DUOX2Q9NRD8 1548 aa15.88■□□□□ 0.13
COL5A1-201ENST00000371817 FAM102AQ5T9C2 384 aaPredicted RBP15.87■□□□□ 0.13
COL5A1-201ENST00000371817 SLFN13Q68D06 897 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 TIMMDC1Q9NPL8 285 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 WEE2P0C1S8 567 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 PPP3CCP48454 512 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 CCDC157Q569K6 752 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 CLEC17AQ6ZS10 378 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 PABPC3Q9H361 631 aaKnown RBP15.87■□□□□ 0.13
COL5A1-201ENST00000371817 RSL24D1Q9UHA3 163 aaKnown RBP15.87■□□□□ 0.13
COL5A1-201ENST00000371817 ABCC2Q92887 1545 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 FOPNLQ96NB1 174 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 ROGDIQ9GZN7 287 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 PPP2R3BQ9Y5P8 575 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 NPC1L1Q9UHC9 1359 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 STAT5AP42229 794 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 STAT5BP51692 787 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 ARF5P84085 180 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 RNF19BQ6ZMZ0 732 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 OR7A2PQ8NGA2 310 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 SSNA1O43805 119 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 TBC1D12O60347 775 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 HUS1O60921 280 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 CCDC36Q8IYA8 594 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 EID3Q8N140 333 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 ATG16L2Q8NAA4 619 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 SPATA16Q9BXB7 569 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 CLCA2Q9UQC9 943 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 DFFAO00273 331 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 CLDN3O15551 220 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 PTGS2P35354 604 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 PRIM2P49643 509 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 PEX3P56589 373 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 TIMM50Q3ZCQ8 353 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 ZNF568Q3ZCX4 644 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 THOC7Q6I9Y2 204 aaKnown RBP15.87■□□□□ 0.13
COL5A1-201ENST00000371817 NOA1Q8NC60 698 aaKnown RBP15.87■□□□□ 0.13
COL5A1-201ENST00000371817 METTL5Q9NRN9 209 aaKnown RBP15.87■□□□□ 0.13
COL5A1-201ENST00000371817 LRRC6Q86X45 466 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 TBC1D19Q8N5T2 526 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 PPP1R14AQ96A00 147 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 ASIC4Q96FT7 647 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 TELO2Q9Y4R8 837 aa15.87■□□□□ 0.13
COL5A1-201ENST00000371817 CSNK2BP67870 215 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 C2CD6Q53TS8 623 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 KIAA1841Q6NSI8 718 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 KCTD1Q719H9 257 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 MMGT1Q8N4V1 131 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 EYA1Q99502 592 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 PLGRKTQ9HBL7 147 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 COMMD9Q9P000 198 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 JAMLQ86YT9 394 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 PKP3Q9Y446 797 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 PGK2P07205 417 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 SOAT1P35610 550 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 MYLK2Q9H1R3 596 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 CHKBQ9Y259 395 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 FAM20BO75063 409 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
COL5A1-201ENST00000371817 TRAP1Q12931 704 aaKnown RBP15.86■□□□□ 0.13
COL5A1-201ENST00000371817 BHMT2Q9H2M3 363 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 ACAD9Q9H845 621 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 H2AFXP16104 143 aaPredicted RBP15.86■□□□□ 0.13
COL5A1-201ENST00000371817 XRCC4Q13426 336 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 OTOAQ7RTW8 1153 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 PID1Q7Z2X4 250 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 GIPC3Q8TF64 312 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 CCDC153Q494R4 210 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 PREPLQ4J6C6 727 aaPredicted RBP15.86■□□□□ 0.13
COL5A1-201ENST00000371817 ANKRD40Q6AI12 368 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 OR6Y1Q8NGX8 325 aa15.86■□□□□ 0.13
COL5A1-201ENST00000371817 RGS18Q9NS28 235 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms