RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 TRABDQ9H4I3 376 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 NEU2Q9Y3R4 380 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 TBKBP1A7MCY6 615 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 MYL2P10916 166 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 CYP2C19P33261 490 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 ACADSBP45954 432 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 C16orf87Q6PH81 154 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 ARHGAP18Q8N392 663 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 ELMO3Q96BJ8 720 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 HES6Q96HZ4 224 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 POP1Q99575 1024 aaKnown RBP8.93□□□□□ -0.98
ABCA4-201ENST00000370225 LRRC1Q9BTT6 524 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 TMEM8AQ9HCN3 771 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 DTNAQ9Y4J8 743 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 TIMM13Q9Y5L4 95 aaPredicted RBP8.93□□□□□ -0.98
ABCA4-201ENST00000370225 ADGRG1Q9Y653 693 aa8.93□□□□□ -0.98
ABCA4-201ENST00000370225 RNF17Q9BXT8 1623 aaKnown RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 TCP11X1B4DZS4 312 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 H7C4K7 107 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 SLC11A2P49281 568 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 EXOSC10Q01780 885 aaKnown RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 NFIAQ12857 509 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 POLD3Q15054 466 aaPredicted RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 SARM1Q6SZW1 724 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 MTHFD1LQ6UB35 978 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 FAM162AQ96A26 154 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 ZFP42Q96MM3 310 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 MAN1C1Q9NR34 630 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 F5H5T6 163 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 KIAA0391O15091 583 aaKnown RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 PSMD3O43242 534 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 ATP8B1O43520 1251 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 ENO3P13929 434 aaPredicted RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 SH3BGRP55822 239 aaPredicted RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 DDX39BQ13838 428 aaKnown RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 PLCL1Q15111 1095 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 TCEA2Q15560 299 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 FBXO33Q7Z6M2 555 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 ATP6V0D2Q8N8Y2 350 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 C9orf72Q96LT7 481 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 C7orf25Q9BPX7 421 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 OSGEPL1Q9H4B0 414 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 CHST12Q9NRB3 414 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 ADM5C9JUS6 153 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 MSH4O15457 936 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 KRT4P19013 534 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 LRRC36Q1X8D7 754 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 ERAP2Q6P179 960 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 TMC7Q7Z402 723 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 IFNLR1Q8IU57 520 aaPredicted RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 ICA1LQ8NDH6 482 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 TSPAN17Q96FV3 270 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 RBM15Q96T37 977 aaKnown RBP eCLIP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 ACTR5Q9H9F9 607 aaPredicted RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 TMEM39AQ9NV64 488 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 SETD4Q9NVD3 440 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 SLC39A10Q9ULF5 831 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 ARHGAP26Q9UNA1 814 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 MYO3AQ8NEV4 1616 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 HEATR9A2RTY3 570 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 NCALDP61601 193 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 BARGINQ6ZT62 677 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 ADGRF2Q8IZF7 708 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 SGF29Q96ES7 293 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 ZMAT2Q96NC0 199 aaKnown RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 OSMRQ99650 979 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 TFR2Q9UP52 801 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 RFX7Q2KHR2 1363 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 FAM187AA6NFU0 413 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 SYNCRIPO60506 623 aaKnown RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 KPNA1P52294 538 aaPredicted RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 AP2B1P63010 937 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 HPCAP84074 193 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 BYSLQ13895 437 aaKnown RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 LAYNQ6UX15 382 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 MIER2Q8N344 545 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 ARRDC4Q8NCT1 418 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 ZC3H15Q8WU90 426 aaKnown RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 NIF3L1Q9GZT8 377 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 FAM32AQ9Y421 112 aaKnown RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 CNTNAP5Q8WYK1 1306 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 PCDH8O95206 1070 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 DDX5P17844 614 aaKnown RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 PTPN7P35236 360 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 CARSP49589 748 aaKnown RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 RAP1GDS1P52306 607 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 SLC16A1P53985 500 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 BACE1P56817 501 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 EFHC1Q5JVL4 640 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 MRPS31Q92665 395 aaKnown RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 EIF2AQ9BY44 585 aaKnown RBP8.92□□□□□ -0.98
ABCA4-201ENST00000370225 WDR35Q9P2L0 1181 aa8.92□□□□□ -0.98
ABCA4-201ENST00000370225 CST8O60676 142 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 ARP10275 920 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 COMTP21964 271 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 SP100P23497 879 aaPredicted RBP8.91□□□□□ -0.98
ABCA4-201ENST00000370225 DHX34Q14147 1143 aaKnown RBP8.91□□□□□ -0.98
ABCA4-201ENST00000370225 PDK1Q15118 436 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 RABL6Q3YEC7 729 aaPredicted RBP8.91□□□□□ -0.98
ABCA4-201ENST00000370225 INTS5Q6P9B9 1019 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms