RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 TDGF1P13385 188 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 GABRR2P28476 465 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 LILRA4P59901 499 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 MCM6Q14566 821 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 ENOX2Q16206 610 aaKnown RBP13.41□□□□□ -0.26
MRPL55-209ENST00000366735 GPR158Q5T848 1215 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 SLFN12LQ6IEE8 588 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 CENPPQ6IPU0 288 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 POTEHQ6S545 545 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 ARID3BQ8IVW6 561 aaPredicted RBP13.41□□□□□ -0.26
MRPL55-209ENST00000366735 THEM5Q8N1Q8 247 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 SYNPOQ8N3V7 929 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 SPPL2BQ8TCT7 592 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 NETO1Q8TDF5 533 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 SENP8Q96LD8 212 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 ZNF560Q96MR9 790 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 ZNF396Q96N95 335 aaPredicted RBP13.41□□□□□ -0.26
MRPL55-209ENST00000366735 SEPT5Q99719 369 aaPredicted RBP13.41□□□□□ -0.26
MRPL55-209ENST00000366735 DNAJC25Q9H1X3 360 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 ASB7Q9H672 318 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 CFAP45Q9UL16 551 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 MYO16Q9Y6X6 1858 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 EML5Q05BV3 1969 aa13.41□□□□□ -0.26
MRPL55-209ENST00000366735 WDR87Q6ZQQ6 2873 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 MYBPHLA2RUH7 354 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 SHISA7A6NL88 538 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 SPECC1L-ADORA2AF8WAN1 911 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 ARNTLO00327 626 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 WEE1P30291 646 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 CTHP32929 405 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 SATB1Q01826 763 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 SIM2Q14190 667 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-209ENST00000366735 KLHL40Q2TBA0 621 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 FOXD4L6Q3SYB3 417 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-209ENST00000366735 MGAT5BQ3V5L5 792 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 JADE1Q6IE81 842 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 FOXD4L3Q6VB84 417 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-209ENST00000366735 DNAJB7Q7Z6W7 309 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-209ENST00000366735 LONP2Q86WA8 852 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 BPIFB1Q8TDL5 484 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 EXOC4Q96A65 974 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 LRRC3Q9BY71 257 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 HAPLN2Q9GZV7 340 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 ZHX3Q9H4I2 956 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 TASP1Q9H6P5 420 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 C2CD2Q9Y426 696 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 ANAPC1Q9H1A4 1944 aa13.4□□□□□ -0.26
MRPL55-209ENST00000366735 A0A0B4J269 797 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 NPHP3-ACAD11A0A0J9YXS1 232 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 FAM189A1O60320 539 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 MBD3O95983 291 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 CYP11A1P05108 521 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 ADRB2P07550 413 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 DDX6P26196 483 aaKnown RBP eCLIP13.39□□□□□ -0.27
MRPL55-209ENST00000366735 LONP1P36776 959 aaKnown RBP13.39□□□□□ -0.27
MRPL55-209ENST00000366735 TAF6P49848 677 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 ZNF131P52739 623 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 ATXN1P54253 815 aaKnown RBP13.39□□□□□ -0.27
MRPL55-209ENST00000366735 AMPD2Q01433 879 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 POU5F1Q01860 360 aaKnown RBP13.39□□□□□ -0.27
MRPL55-209ENST00000366735 SPEM2Q0P670 501 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 DHX8Q14562 1220 aaKnown RBP13.39□□□□□ -0.27
MRPL55-209ENST00000366735 SV2CQ496J9 727 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 SLC39A12Q504Y0 691 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 C9orf57Q5W0N0 161 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 FAM173BQ6P4H8 233 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 CEP68Q76N32 757 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 NT5DC4Q86YG4 428 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 ATAD1Q8NBU5 361 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 HVCN1Q96D96 273 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 KIF9Q9HAQ2 790 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 CPSF3Q9UKF6 684 aaKnown RBP13.39□□□□□ -0.27
MRPL55-209ENST00000366735 SLC27A5Q9Y2P5 690 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 NCANO14594 1321 aa13.39□□□□□ -0.27
MRPL55-209ENST00000366735 ATG2BQ96BY7 2078 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 VNN2O95498 520 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 NFICP08651 508 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 AVPR1AP37288 418 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 PNPLA4P41247 253 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 GUCY2FP51841 1108 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 UBE2HP62256 183 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 FOXK1P85037 733 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 GTF2BQ00403 316 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 LPAL2Q16609 132 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 ITPRIPL2Q3MIP1 535 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 ARSHQ5FYA8 562 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 ADALQ6DHV7 355 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 GAREM2Q75VX8 874 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 DCP1BQ8IZD4 617 aaKnown RBP13.38□□□□□ -0.27
MRPL55-209ENST00000366735 LEO1Q8WVC0 666 aaPredicted RBP13.38□□□□□ -0.27
MRPL55-209ENST00000366735 DDX1Q92499 740 aaKnown RBP13.38□□□□□ -0.27
MRPL55-209ENST00000366735 LARP4BQ92615 738 aaKnown RBP13.38□□□□□ -0.27
MRPL55-209ENST00000366735 RAD54LQ92698 747 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 PYM1Q9BRP8 204 aaKnown RBP13.38□□□□□ -0.27
MRPL55-209ENST00000366735 ZCWPW1Q9H0M4 648 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 CRISPLD1Q9H336 500 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 RCOR1Q9UKL0 485 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 AGO2Q9UKV8 859 aaKnown RBP13.38□□□□□ -0.27
MRPL55-209ENST00000366735 GPR179Q6PRD1 2367 aa13.38□□□□□ -0.27
MRPL55-209ENST00000366735 PTPRDP23468 1912 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms