RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 GARTP22102 1010 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 TMOD1P28289 359 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 CYP2J2P51589 502 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 PRKCQQ04759 706 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 MXD4Q14582 209 aaPredicted RBP12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 MEA1Q16626 185 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 TSR1Q2NL82 804 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 E4F1Q66K89 784 aaPredicted RBP12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 LAIR1Q6GTX8 287 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 TSSK4Q6SA08 328 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 INTS8Q75QN2 995 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 CCAR2Q8N163 923 aaKnown RBP12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 C17orf53Q8N3J3 647 aaPredicted RBP12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 XXYLT1Q8NBI6 393 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 NEK11Q8NG66 645 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 DEPTORQ8TB45 409 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 SLC35C1Q96A29 364 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 SCLT1Q96NL6 688 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 KIFC3Q9BVG8 833 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 TRAIPQ9BWF2 469 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 FAM126AQ9BYI3 521 aaPredicted RBP12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 MMRN2Q9H8L6 949 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 PIDD1Q9HB75 910 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 PRMT8Q9NR22 394 aaPredicted RBP12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 MARCH5Q9NX47 278 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 HSPBP1Q9NZL4 362 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 RAB23Q9ULC3 237 aa12.11□□□□□ -0.47
CSNK1E-202ENST00000366216 KIF26AQ9ULI4 1882 aaPredicted RBP12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 SHISA7A6NL88 538 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 KIAA0391O15091 583 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 TEX28O15482 410 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 ASAP2O43150 1006 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 URODP06132 367 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 SPATA31D3P0C874 917 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 SKIP12755 728 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 PMLP29590 882 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 HNRNPH3P31942 346 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 KLK7P49862 253 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 EFNA5P52803 228 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 SHC2P98077 582 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 CDK17Q00537 523 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 BFSP1Q12934 665 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 STRN3Q13033 797 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 HSP90AA2PQ14568 343 aaPredicted RBP12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 SLC44A4Q53GD3 710 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 ZBTB41Q5SVQ8 909 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 RSPO2Q6UXX9 243 aaPredicted RBP12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 SPATA31D4Q6ZUB0 917 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 TAS1R3Q7RTX0 852 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 PSPC1Q8WXF1 523 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 DDX1Q92499 740 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 FGF14Q92915 247 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 CLDN23Q96B33 292 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 RPS6KC1Q96S38 1066 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 CBWD1Q9BRT8 395 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 NUCKS1Q9H1E3 243 aaKnown RBP12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 LTB4R2Q9NPC1 389 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 PLCB1Q9NQ66 1216 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 CHST12Q9NRB3 414 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 CEP72Q9P209 647 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 SSX2IPQ9Y2D8 614 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 STYXL1Q9Y6J8 313 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 ZFP37Q9Y6Q3 630 aaPredicted RBP12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 TRIP11Q15643 1979 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 WDFY3Q8IZQ1 3526 aa12.1□□□□□ -0.47
CSNK1E-202ENST00000366216 ANKRD63C9JTQ0 380 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 K7ERI5 159 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 PMM2O15305 246 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 P4HA2O15460 535 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 ZSCAN12O43309 604 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 SOD2P04179 222 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 KRT13P13646 458 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 CD72P21854 359 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 ADSSP30520 456 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 RPS9P46781 194 aaKnown RBP12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 CAPSQ13938 189 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 LPAL2Q16609 132 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 EXOC3L4Q17RC7 722 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 DCAF17Q5H9S7 520 aaPredicted RBP12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 CDCA2Q69YH5 1023 aaPredicted RBP12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 TWF2Q6IBS0 349 aaKnown RBP12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 SLC39A4Q6P5W5 647 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 PARM1Q6UWI2 310 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 GBP6Q6ZN66 633 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 AGMOQ6ZNB7 445 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 RNF168Q8IYW5 571 aaPredicted RBP12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 HDAC7Q8WUI4 952 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 PRPF31Q8WWY3 499 aaKnown RBP12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 NLRP7Q8WX94 980 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 BAP1Q92560 729 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 LSM14BQ9BX40 385 aaKnown RBP12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 C2orf40Q9H1Z8 148 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 PCIF1Q9H4Z3 704 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 KIAA1586Q9HCI6 787 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 FAM207AQ9NSI2 230 aaPredicted RBP12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 AGPAT5Q9NUQ2 364 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 ZNHIT6Q9NWK9 470 aaKnown RBP12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 FBXL5Q9UKA1 691 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 DAAM1Q9Y4D1 1078 aa12.09□□□□□ -0.47
CSNK1E-202ENST00000366216 NUP205Q92621 2012 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms