RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 MDH1BQ5I0G3 518 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 FKBP1CQ5VVH2 108 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 SV2AQ7L0J3 742 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 AGGF1Q8N302 714 aaeCLIP9.87□□□□□ -0.832e-11■■■■□ 26.1
SMG6-202ENST00000354901 MTMR14Q8NCE2 650 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 FBXL13Q8NEE6 735 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 NRG4Q8WWG1 115 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 PTPRN2Q92932 1015 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 WNK4Q96J92 1243 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 TXLNGYQ9BZA5 131 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 WNT8AQ9H1J5 351 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 PFDN4Q9NQP4 134 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 KLHL11Q9NVR0 708 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 GABBR1Q9UBS5 961 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 PASKQ96RG2 1323 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 GSTTP1A0A1W2PQM5 241 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 AGTP01019 485 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 ITGA2BP08514 1039 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 ZNF24P17028 368 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 RFX1P22670 979 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 HSD17B4P51659 736 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 GTF2BQ00403 316 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 THOC5Q13769 683 aaKnown RBP9.87□□□□□ -0.83
SMG6-202ENST00000354901 CCDC92Q53HC0 331 aaPredicted RBP9.87□□□□□ -0.83
SMG6-202ENST00000354901 TAF1BQ53T94 588 aaPredicted RBP9.87□□□□□ -0.83
SMG6-202ENST00000354901 SLC25A41Q8N5S1 370 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 KCTD17Q8N5Z5 321 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 AGBL3Q8NEM8 1001 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 TAOK3Q9H2K8 898 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 RAB20Q9NX57 234 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 TMCO1Q9UM00 188 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 PFASO15067 1338 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 TRIM43BA6NCK2 446 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 TNNI1P19237 187 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 RRM1P23921 792 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 CHKAP35790 457 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 PTGER2P43116 358 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 ACOT2P49753 483 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 AUHQ13825 339 aaKnown RBP9.87□□□□□ -0.83
SMG6-202ENST00000354901 SPDYE2Q495Y8 402 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 PABPC1LQ4VXU2 614 aaKnown RBP9.87□□□□□ -0.83
SMG6-202ENST00000354901 SEZ6Q53EL9 994 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 HP1BP3Q5SSJ5 553 aaPredicted RBP9.87□□□□□ -0.83
SMG6-202ENST00000354901 TSHZ1Q6ZSZ6 1077 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 ANO5Q75V66 913 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 TMEM161BQ8NDZ6 487 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 HIPK4Q8NE63 616 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 CFAP61Q8NHU2 1237 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 HELQQ8TDG4 1101 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 SHC3Q92529 594 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 HERPUD2Q9BSE4 406 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 STMN4Q9H169 189 aaPredicted RBP9.87□□□□□ -0.83
SMG6-202ENST00000354901 DCLRE1BQ9H816 532 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 PIM2Q9P1W9 311 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 PDP2Q9P2J9 529 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 DOLKQ9UPQ8 538 aa9.87□□□□□ -0.83
SMG6-202ENST00000354901 PODXLO00592 558 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 RIPK2O43353 540 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 MARK3P27448 753 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 ADARP55265 1226 aaKnown RBP9.86□□□□□ -0.83
SMG6-202ENST00000354901 PSMC5P62195 406 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 CCDC15Q0P6D6 951 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 OVGP1Q12889 678 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 MTMR2Q13614 643 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 BAATQ14032 418 aaPredicted RBP9.86□□□□□ -0.83
SMG6-202ENST00000354901 PGM5Q15124 567 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 KYNUQ16719 465 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 SH2D4BQ5SQS7 431 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 PRAMEF18Q5VWM3 479 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 SWSAP1Q6NVH7 229 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 TRIM67Q6ZTA4 783 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 SATL1Q86VE3 508 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 KBTBD2Q8IY47 623 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 ANKLE1Q8NAG6 615 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 LENG1Q96BZ8 264 aaPredicted RBP9.86□□□□□ -0.83
SMG6-202ENST00000354901 C11orf70Q9BRQ4 267 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 CDC42EP4Q9H3Q1 356 aaKnown RBP9.86□□□□□ -0.83
SMG6-202ENST00000354901 ALG13Q9NP73 1137 aaKnown RBP9.86□□□□□ -0.83
SMG6-202ENST00000354901 UBN1Q9NPG3 1134 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 GTF3C4Q9UKN8 822 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 BRCA1P38398 1863 aaKnown RBP9.86□□□□□ -0.83
SMG6-202ENST00000354901 TBX10O75333 385 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 EGFRP00533 1210 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 VAV1P15498 845 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 MUTP22033 750 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 CTNNA2P26232 953 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 MLH1P40692 756 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 ACAP1Q15027 740 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 TMED2Q15363 201 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 LIN52Q52LA3 116 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 GRAMD4Q6IC98 578 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 NLRX1Q86UT6 975 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 ST13P4Q8IZP2 240 aaPredicted RBP9.86□□□□□ -0.83
SMG6-202ENST00000354901 MORC4Q8TE76 937 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 SEPT9Q9UHD8 586 aaPredicted RBP9.86□□□□□ -0.83
SMG6-202ENST00000354901 PCYOX1Q9UHG3 505 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 RIPK3Q9Y572 518 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 UBIAD1Q9Y5Z9 338 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 ADGRA3Q8IWK6 1321 aa9.86□□□□□ -0.83
SMG6-202ENST00000354901 WDR64B1ANS9 1081 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms