RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 GEMIN4P57678 1058 aaKnown RBP16.73■□□□□ 0.27
PTPN11-201ENST00000351677 RARS2Q5T160 578 aaKnown RBP16.73■□□□□ 0.27
PTPN11-201ENST00000351677 LRRC34Q8IZ02 419 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 AGGF1Q8N302 714 aaeCLIP16.73■□□□□ 0.27
PTPN11-201ENST00000351677 GMCL1Q96IK5 515 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 MANSC1Q9H8J5 431 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 PRLRP16471 622 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 SARSP49591 514 aaKnown RBP16.73■□□□□ 0.27
PTPN11-201ENST00000351677 SOX10P56693 466 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 PDAP1Q13442 181 aaKnown RBP16.73■□□□□ 0.27
PTPN11-201ENST00000351677 PDK1Q15118 436 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 CCDC33Q8N5R6 958 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 IPMKQ8NFU5 416 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 PPLO60437 1756 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 ACADSBP45954 432 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 TAS1R2Q8TE23 839 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 DPP3Q9NY33 737 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 L1RE1Q9UN81 338 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 TMEM247A6NEH6 219 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 PSTPIP1O43586 416 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 VEPH1Q14D04 833 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 CYP2W1Q8TAV3 490 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 PPCSQ9HAB8 311 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 TRPC7Q9HCX4 862 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 CASS4Q9NQ75 786 aa16.73■□□□□ 0.27
PTPN11-201ENST00000351677 POLBP06746 335 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 NCAM1P13591 858 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 KDM7AQ6ZMT4 941 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 GMCL1P1Q8NEA9 526 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 KATNAL1Q9BW62 490 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 TRAPPC3O43617 180 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 MYL2P10916 166 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 CHI3L2Q15782 390 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 COL23A1Q86Y22 540 aaPredicted RBP16.72■□□□□ 0.27
PTPN11-201ENST00000351677 GPRC5AQ8NFJ5 357 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 SERPINB12Q96P63 405 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 HNRNPCL1O60812 293 aaKnown RBP16.72■□□□□ 0.27
PTPN11-201ENST00000351677 CLCN3P51790 818 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 RIBC1Q8N443 379 aaPredicted RBP16.72■□□□□ 0.27
PTPN11-201ENST00000351677 CEP19Q96LK0 163 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 ANKZF1Q9H8Y5 726 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 TRAF3IP3Q9Y228 551 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 TNS2Q63HR2 1409 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 SPAG6O75602 509 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 MEI1Q5TIA1 1274 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 ELMO3Q96BJ8 720 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 PSMD3O43242 534 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 RRM1P23921 792 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 SPRP35270 261 aaPredicted RBP16.72■□□□□ 0.27
PTPN11-201ENST00000351677 CPA2P48052 419 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 DGKDQ16760 1214 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 ARMC2Q8NEN0 867 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 ZC3H15Q8WU90 426 aaKnown RBP16.72■□□□□ 0.27
PTPN11-201ENST00000351677 TMX2Q9Y320 296 aa16.72■□□□□ 0.27
PTPN11-201ENST00000351677 AP3B1O00203 1094 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 OGTO15294 1046 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 ZNF189O75820 626 aaPredicted RBP16.71■□□□□ 0.27
PTPN11-201ENST00000351677 RAP1GAPP47736 663 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 OVGP1Q12889 678 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 TTC30AQ86WT1 665 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 ZC3H4Q9UPT8 1303 aaKnown RBP16.71■□□□□ 0.27
PTPN11-201ENST00000351677 IGF2BP3O00425 579 aaKnown RBP eCLIP16.71■□□□□ 0.27
PTPN11-201ENST00000351677 DPYSL4O14531 572 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 AIM2O14862 343 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 LRRC23Q53EV4 343 aaPredicted RBP16.71■□□□□ 0.27
PTPN11-201ENST00000351677 EFHC1Q5JVL4 640 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 NOTUMQ6P988 496 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 PNMA5Q96PV4 448 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 KIF17Q9P2E2 1029 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 SNX5Q9Y5X3 404 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 B2RBV5 119 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 TRIM49D1C9J1S8 452 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 H3BQF6 201 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 ANGPT2O15123 496 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 CAND2O75155 1236 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 SUPT20HL2P0C7V6 817 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 SHMT1P34896 483 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 IL31Q6EBC2 164 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 RFWD2Q8NHY2 731 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 MTMR8Q96EF0 704 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 SEPT5Q99719 369 aaPredicted RBP16.71■□□□□ 0.27
PTPN11-201ENST00000351677 NUDT12Q9BQG2 462 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 EHD4Q9H223 541 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 SEC24DO94855 1032 aaPredicted RBP16.71■□□□□ 0.27
PTPN11-201ENST00000351677 GLI1P08151 1106 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 RPS12P25398 132 aaKnown RBP16.71■□□□□ 0.27
PTPN11-201ENST00000351677 UGP2Q16851 508 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 ACTRT1Q8TDG2 376 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 E2F7Q96AV8 911 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 ZNF669Q96BR6 464 aaPredicted RBP16.71■□□□□ 0.27
PTPN11-201ENST00000351677 PARK7Q99497 189 aaKnown RBP16.71■□□□□ 0.27
PTPN11-201ENST00000351677 TRIM54Q9BYV2 358 aa16.71■□□□□ 0.27
PTPN11-201ENST00000351677 CCL15-CCL14A0A0B4J2E2 113 aa16.71■□□□□ 0.26
PTPN11-201ENST00000351677 PGK2P07205 417 aa16.71■□□□□ 0.26
PTPN11-201ENST00000351677 HOXD10P28358 340 aa16.71■□□□□ 0.26
PTPN11-201ENST00000351677 NAMPTP43490 491 aa16.71■□□□□ 0.26
PTPN11-201ENST00000351677 CCL15Q16663 113 aa16.71■□□□□ 0.26
PTPN11-201ENST00000351677 CAPRIN2Q6IMN6 1127 aaKnown RBP16.71■□□□□ 0.26
PTPN11-201ENST00000351677 AGO4Q9HCK5 861 aaKnown RBP16.71■□□□□ 0.26
PTPN11-201ENST00000351677 MTO1Q9Y2Z2 717 aaKnown RBP16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms