RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 HSPBP1Q9NZL4 362 aa19.13■□□□□ 0.65
CKLF-202ENST00000345436 PCDHA7Q9UN72 937 aa19.13■□□□□ 0.65
CKLF-202ENST00000345436 ATP6V1DQ9Y5K8 247 aa19.13■□□□□ 0.65
CKLF-202ENST00000345436 SNX9Q9Y5X1 595 aa19.13■□□□□ 0.65
CKLF-202ENST00000345436 DOCK6Q96HP0 2047 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 HEPACAM2A8MVW5 462 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 MOSPD3O75425 235 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 VNN2O95498 520 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 HAPLN1P10915 354 aaPredicted RBP19.12■□□□□ 0.65
CKLF-202ENST00000345436 GJA1P17302 382 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 FCARP24071 287 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 GABRR2P28476 465 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 MLLT6P55198 1093 aaPredicted RBP19.12■□□□□ 0.65
CKLF-202ENST00000345436 RPL10AP62906 217 aaKnown RBP19.12■□□□□ 0.65
CKLF-202ENST00000345436 GRM2Q14416 872 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 PPP2R5DQ14738 602 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 RESP18Q5W5W9 173 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 PDCL2Q8N4E4 241 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 LRRC3Q9BY71 257 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 DNAJC25Q9H1X3 360 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 CRISPLD1Q9H336 500 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 ZNF334Q9HCZ1 680 aaPredicted RBP19.12■□□□□ 0.65
CKLF-202ENST00000345436 ABCB6Q9NP58 842 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 HEBP1Q9NRV9 189 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 INTS13Q9NVM9 706 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 THG1LQ9NWX6 298 aaKnown RBP19.12■□□□□ 0.65
CKLF-202ENST00000345436 DDX43Q9NXZ2 648 aaKnown RBP19.12■□□□□ 0.65
CKLF-202ENST00000345436 OBP2AQ9NY56 170 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 DLGAP2Q9P1A6 1054 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 USP25Q9UHP3 1055 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 RCOR1Q9UKL0 485 aa19.12■□□□□ 0.65
CKLF-202ENST00000345436 CHADO15335 359 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 CSH1P0DML2 217 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 CSH2P0DML3 217 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 WEE1P30291 646 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 VIPR2P41587 438 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 RPS9P46781 194 aaKnown RBP19.11■□□□□ 0.65
CKLF-202ENST00000345436 MAPRE1Q15691 268 aaKnown RBP19.11■□□□□ 0.65
CKLF-202ENST00000345436 GPR158Q5T848 1215 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 VITQ6UXI7 678 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 EPM2AIP1Q7L775 607 aaPredicted RBP19.11■□□□□ 0.65
CKLF-202ENST00000345436 TMC8Q8IU68 726 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 WDR49Q8IV35 697 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 ARID3BQ8IVW6 561 aaPredicted RBP19.11■□□□□ 0.65
CKLF-202ENST00000345436 XXYLT1Q8NBI6 393 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 LEO1Q8WVC0 666 aaPredicted RBP19.11■□□□□ 0.65
CKLF-202ENST00000345436 HPDLQ96IR7 371 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 IER2Q9BTL4 223 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 FGFBP2Q9BYJ0 223 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 MTMR12Q9C0I1 747 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 TASP1Q9H6P5 420 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 UXTQ9UBK9 157 aaPredicted RBP19.11■□□□□ 0.65
CKLF-202ENST00000345436 FBXO4Q9UKT5 387 aa19.11■□□□□ 0.65
CKLF-202ENST00000345436 PRR23AA6NEV1 266 aa19.1■□□□□ 0.65
CKLF-202ENST00000345436 SOBPA7XYQ1 873 aa19.1■□□□□ 0.65
CKLF-202ENST00000345436 SLFN14P0C7P3 912 aa19.1■□□□□ 0.65
CKLF-202ENST00000345436 TNNI1P19237 187 aa19.1■□□□□ 0.65
CKLF-202ENST00000345436 DDX6P26196 483 aaKnown RBP eCLIP19.1■□□□□ 0.65
CKLF-202ENST00000345436 PLCB2Q00722 1185 aa19.1■□□□□ 0.65
CKLF-202ENST00000345436 PSMD2Q13200 908 aa19.1■□□□□ 0.65
CKLF-202ENST00000345436 SNRNP35Q16560 246 aaKnown RBP19.1■□□□□ 0.65
CKLF-202ENST00000345436 ARHGAP29Q52LW3 1261 aa19.1■□□□□ 0.65
CKLF-202ENST00000345436 ADGRF2Q8IZF7 708 aa19.1■□□□□ 0.65
CKLF-202ENST00000345436 SPRYD3Q8NCJ5 442 aa19.1■□□□□ 0.65
CKLF-202ENST00000345436 FAM3CQ92520 227 aa19.1■□□□□ 0.65
CKLF-202ENST00000345436 HPS3Q969F9 1004 aa19.1■□□□□ 0.65
CKLF-202ENST00000345436 CCDC47Q96A33 483 aaKnown RBP19.1■□□□□ 0.65
CKLF-202ENST00000345436 CLDN23Q96B33 292 aa19.1■□□□□ 0.65
CKLF-202ENST00000345436 C8orf33Q9H7E9 229 aaPredicted RBP19.1■□□□□ 0.65
CKLF-202ENST00000345436 AGPAT3Q9NRZ7 376 aa19.1■□□□□ 0.65
CKLF-202ENST00000345436 NOTCH4Q99466 2003 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 SOAT2O75908 522 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 MYL1P05976 194 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 FAM163BP0C2L3 166 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 AFMP43652 599 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 KPNA1P52294 538 aaPredicted RBP19.09■□□□□ 0.65
CKLF-202ENST00000345436 KRT85P78386 507 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 DNM1Q05193 864 aaKnown RBP19.09■□□□□ 0.65
CKLF-202ENST00000345436 ZNF528Q3MIS6 628 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 INTS6LQ5JSJ4 861 aaKnown RBP19.09■□□□□ 0.65
CKLF-202ENST00000345436 C4orf50Q6ZRC1 276 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 GAREM2Q75VX8 874 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 LRRTM3Q86VH5 581 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 CBWD2Q8IUF1 395 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 SPATA2LQ8IUW3 424 aaPredicted RBP19.09■□□□□ 0.65
CKLF-202ENST00000345436 TTC9BQ8N6N2 239 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 RDH13Q8NBN7 331 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 ZSWIM2Q8NEG5 633 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 GIPC2Q8TF65 315 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 MRPS31Q92665 395 aaKnown RBP19.09■□□□□ 0.65
CKLF-202ENST00000345436 FUBP3Q96I24 572 aaKnown RBP eCLIP19.09■□□□□ 0.65
CKLF-202ENST00000345436 L1RE1Q9UN81 338 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 PIAS3Q9Y6X2 628 aa19.09■□□□□ 0.65
CKLF-202ENST00000345436 ZFHX2Q9C0A1 2572 aaPredicted RBP19.09■□□□□ 0.65
CKLF-202ENST00000345436 KIF20AO95235 890 aa19.08■□□□□ 0.64
CKLF-202ENST00000345436 LMNAP02545 664 aaKnown RBP19.08■□□□□ 0.64
CKLF-202ENST00000345436 SP9P0CG40 484 aa19.08■□□□□ 0.64
CKLF-202ENST00000345436 DLATP10515 647 aaKnown RBP19.08■□□□□ 0.64
CKLF-202ENST00000345436 CD72P21854 359 aa19.08■□□□□ 0.64
CKLF-202ENST00000345436 CMA1P23946 247 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms