RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ZSCAN22P10073 491 aaPredicted RBP13.39□□□□□ -0.27
SGCA-202ENST00000344627 GARTP22102 1010 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 CCR2P41597 374 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 ASIC1P78348 528 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 GRM2Q14416 872 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 VEPH1Q14D04 833 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 TAF12Q16514 161 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 SV2CQ496J9 727 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 SLC39A12Q504Y0 691 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 RALGPS2Q86X27 583 aaPredicted RBP13.39□□□□□ -0.27
SGCA-202ENST00000344627 EFCAB13Q8IY85 973 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 SPEM1Q8N4L4 309 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 IQUBQ8NA54 791 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 ZSWIM2Q8NEG5 633 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 HPS3Q969F9 1004 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 PSMG2Q969U7 264 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 EXOC4Q96A65 974 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 ZNF560Q96MR9 790 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 SEPT5Q99719 369 aaPredicted RBP13.39□□□□□ -0.27
SGCA-202ENST00000344627 STRA6Q9BX79 667 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 FGFBP2Q9BYJ0 223 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 TNMDQ9H2S6 317 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 TMEM206Q9H813 350 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 LMAN1LQ9HAT1 526 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 OLFML3Q9NRN5 406 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 RBAKQ9NYW8 714 aaPredicted RBP13.39□□□□□ -0.27
SGCA-202ENST00000344627 AGAP1Q9UPQ3 857 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 PIAS3Q9Y6X2 628 aa13.39□□□□□ -0.27
SGCA-202ENST00000344627 MTMR11A4FU01 709 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 HEPACAM2A8MVW5 462 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 DPYSL4O14531 572 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 EXTL3O43909 919 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 MOSPD3O75425 235 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 VNN2O95498 520 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 CD72P21854 359 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 CDC25CP30307 473 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 POLR2BP30876 1174 aaKnown RBP13.38□□□□□ -0.27
SGCA-202ENST00000344627 HOXA6P31267 233 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 CXCL12P48061 93 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 ME1P48163 572 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 AMPD2Q01433 879 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 BFSP1Q12934 665 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 MTAPQ13126 283 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 TEAD2Q15562 447 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 MGAT5BQ3V5L5 792 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 WSCD1Q658N2 575 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 LAIR1Q6GTX8 287 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 CENPPQ6IPU0 288 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 GPIHBP1Q8IV16 184 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 CSGALNACT2Q8N6G5 542 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 ZSWIM3Q96MP5 696 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 GCNAQ96QF7 691 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 CBWD1Q9BRT8 395 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 RTKNQ9BST9 563 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 CRISPLD1Q9H336 500 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 THG1LQ9NWX6 298 aaKnown RBP13.38□□□□□ -0.27
SGCA-202ENST00000344627 FAM13BQ9NYF5 915 aa13.38□□□□□ -0.27
SGCA-202ENST00000344627 CACNA1IQ9P0X4 2223 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 DCHS1Q96JQ0 3298 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 A0A1W2PRU2 124 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 FRMD3A2A2Y4 597 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 KPNA7A9QM74 516 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 ARNTLO00327 626 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
SGCA-202ENST00000344627 F13A1P00488 732 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 ITGB3P05106 788 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 CHRNB1P11230 501 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 PDIA4P13667 645 aaKnown RBP13.37□□□□□ -0.27
SGCA-202ENST00000344627 DDX6P26196 483 aaKnown RBP eCLIP13.37□□□□□ -0.27
SGCA-202ENST00000344627 VIPR2P41587 438 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 POTEHQ6S545 545 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 SHC4Q6S5L8 630 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 DNAJB7Q7Z6W7 309 aaPredicted RBP13.37□□□□□ -0.27
SGCA-202ENST00000344627 TMC8Q8IU68 726 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 BRSK2Q8IWQ3 736 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 TTC9BQ8N6N2 239 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 OR10T2Q8NGX3 314 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 SHKBP1Q8TBC3 707 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 SPPL2BQ8TCT7 592 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 LRRC3Q9BY71 257 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 ZCWPW1Q9H0M4 648 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 CUEDC2Q9H467 287 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 PDE11AQ9HCR9 933 aa13.37□□□□□ -0.27
SGCA-202ENST00000344627 ABI2Q9NYB9 513 aaPredicted RBP13.37□□□□□ -0.27
SGCA-202ENST00000344627 NDRG2Q9UN36 371 aaKnown RBP13.37□□□□□ -0.27
SGCA-202ENST00000344627 ZNF638Q14966 1978 aaKnown RBP13.36□□□□□ -0.27
SGCA-202ENST00000344627 FANCMQ8IYD8 2048 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 CCDC163A0A0D9SF12 145 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 MYBPHLA2RUH7 354 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 ZNF233A6NK53 670 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 SHISA7A6NL88 538 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 NRG2O14511 850 aaPredicted RBP13.36□□□□□ -0.27
SGCA-202ENST00000344627 HUS1O60921 280 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 RETP07949 1114 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 TMEM191BP0C7N4 346 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 TDGF1P13385 188 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 PNPLA4P41247 253 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 KPNA1P52294 538 aaPredicted RBP13.36□□□□□ -0.27
SGCA-202ENST00000344627 WNT7BP56706 349 aa13.36□□□□□ -0.27
SGCA-202ENST00000344627 TSPY1Q01534 308 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms