RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 TDRD12Q587J7 1177 aaKnown RBP15.72■□□□□ 0.11
CSRP1-201ENST00000340006 VARS2Q5ST30 1063 aaKnown RBP15.72■□□□□ 0.11
CSRP1-201ENST00000340006 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.72■□□□□ 0.11
CSRP1-201ENST00000340006 IRF2BP2Q7Z5L9 587 aa15.72■□□□□ 0.11
CSRP1-201ENST00000340006 SLC47A2Q86VL8 602 aa15.72■□□□□ 0.11
CSRP1-201ENST00000340006 OSTM1Q86WC4 334 aa15.72■□□□□ 0.11
CSRP1-201ENST00000340006 TMEM139Q8IV31 216 aa15.72■□□□□ 0.11
CSRP1-201ENST00000340006 TNIP3Q96KP6 325 aa15.72■□□□□ 0.11
CSRP1-201ENST00000340006 NKX2-4Q9H2Z4 354 aa15.72■□□□□ 0.11
CSRP1-201ENST00000340006 CERS4Q9HA82 394 aa15.72■□□□□ 0.11
CSRP1-201ENST00000340006 ACP6Q9NPH0 428 aa15.72■□□□□ 0.11
CSRP1-201ENST00000340006 HMGXB4Q9UGU5 601 aa15.72■□□□□ 0.11
CSRP1-201ENST00000340006 GABRDO14764 452 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 HCRTO43612 131 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 CALCAP01258 141 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 SOD2P04179 222 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 LINC00271P0C7V0 271 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 FGFR3P22607 806 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 PCSK1P29120 753 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 CTXN3Q4LDR2 81 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 UBR7Q8N806 425 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 WHAMMQ8TF30 809 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 RIN2Q8WYP3 895 aaPredicted RBP15.71■□□□□ 0.11
CSRP1-201ENST00000340006 TWNKQ96RR1 684 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 PLVAPQ9BX97 442 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 ELOVL4Q9GZR5 314 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 PDCL3Q9H2J4 239 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 STK39Q9UEW8 545 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 CNTN6Q9UQ52 1028 aa15.71■□□□□ 0.11
CSRP1-201ENST00000340006 BZW2Q9Y6E2 419 aaKnown RBP15.71■□□□□ 0.11
CSRP1-201ENST00000340006 H7C4K7 107 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 THAP12O43422 761 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 OAZ2O95190 189 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 SERPING1P05155 500 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 GNA15P30679 374 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 CDR1P51861 262 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 PLCB3Q01970 1234 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 TAP1Q03518 808 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 BMS1Q14692 1282 aaKnown RBP15.71■□□□□ 0.1
CSRP1-201ENST00000340006 RTP2Q5QGT7 225 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 PPP2R2DQ66LE6 453 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 ANKS3Q6ZW76 656 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 TMC7Q7Z402 723 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 SLC4A11Q8NBS3 891 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 MICAL1Q8TDZ2 1067 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 ACBD6Q9BR61 282 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 DPEP3Q9H4B8 488 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 HAUS4Q9H6D7 363 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 VWA8A3KMH1 1905 aa15.71■□□□□ 0.1
CSRP1-201ENST00000340006 ATP2C2O75185 946 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 ARHGEF15O94989 841 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 CSPG5O95196 566 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 RB1P06400 928 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 PAEPP09466 180 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 CYP11B1P15538 503 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 PTPN1P18031 435 aaKnown RBP15.7■□□□□ 0.1
CSRP1-201ENST00000340006 DNAJB2P25686 324 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 PDE6CP51160 858 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 ARPP19P56211 112 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 PSMC1P62191 440 aaKnown RBP15.7■□□□□ 0.1
CSRP1-201ENST00000340006 TSPY1Q01534 308 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 TAF3Q5VWG9 929 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 SPRED2Q7Z698 418 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 C12orf29Q8N999 325 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 SPATA18Q8TC71 538 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 KIAA1524Q8TCG1 905 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 SAMD11Q96NU1 681 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 LPIN3Q9BQK8 851 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.7■□□□□ 0.1
CSRP1-201ENST00000340006 VN1R3Q9BXE9 311 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 MRPL17Q9NRX2 175 aaKnown RBP15.7■□□□□ 0.1
CSRP1-201ENST00000340006 SEPT11Q9NVA2 429 aaKnown RBP15.7■□□□□ 0.1
CSRP1-201ENST00000340006 CDH9Q9ULB4 789 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 KIAA1257Q9ULG3 409 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 MYH10P35580 1976 aa15.7■□□□□ 0.1
CSRP1-201ENST00000340006 HNRNPH3P31942 346 aaKnown RBP15.69■□□□□ 0.1
CSRP1-201ENST00000340006 GLUD2P49448 558 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 E4F1Q66K89 784 aaPredicted RBP15.69■□□□□ 0.1
CSRP1-201ENST00000340006 WDR59Q6PJI9 974 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 PRSS55Q6UWB4 352 aaPredicted RBP15.69■□□□□ 0.1
CSRP1-201ENST00000340006 CYP26C1Q6V0L0 522 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 CRYBG2Q8N1P7 616 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 B3GALNT2Q8NCR0 500 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 ZNF606Q8WXB4 792 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 CHP1Q99653 195 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 C11orf84Q9BUA3 381 aaPredicted RBP15.69■□□□□ 0.1
CSRP1-201ENST00000340006 DEF6Q9H4E7 631 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 CHST7Q9NS84 486 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 GTF3C4Q9UKN8 822 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 PLXNA4Q9HCM2 1894 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 ARHGAP6O43182 974 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 MED7O43513 233 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 CXCL14O95715 111 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 URODP06132 367 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 VDRP11473 427 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 TNFAIP3P21580 790 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 FECHP22830 423 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 SSTR3P32745 418 aaPredicted RBP15.69■□□□□ 0.1
CSRP1-201ENST00000340006 ERVK-21P61565 698 aa15.69■□□□□ 0.1
CSRP1-201ENST00000340006 MRPL58Q14197 206 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms