RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 LPIN3Q9BQK8 851 aa18.68■□□□□ 0.58
CHGA-202ENST00000334654 ACBD6Q9BR61 282 aa18.68■□□□□ 0.58
CHGA-202ENST00000334654 NUP58Q9BVL2 599 aa18.68■□□□□ 0.58
CHGA-202ENST00000334654 EDEM3Q9BZQ6 932 aa18.68■□□□□ 0.58
CHGA-202ENST00000334654 SNX25Q9H3E2 840 aa18.68■□□□□ 0.58
CHGA-202ENST00000334654 DPEP3Q9H4B8 488 aa18.68■□□□□ 0.58
CHGA-202ENST00000334654 BACE2Q9Y5Z0 518 aa18.68■□□□□ 0.58
CHGA-202ENST00000334654 A0A1W2PQJ5 194 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 A8MXQ7 604 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 F8VZ95 297 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 ATP2C2O75185 946 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 CXCL14O95715 111 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 URODP06132 367 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 RPL17P18621 184 aaKnown RBP18.67■□□□□ 0.58
CHGA-202ENST00000334654 ACAT1P24752 427 aaKnown RBP18.67■□□□□ 0.58
CHGA-202ENST00000334654 CDC25BP30305 580 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 FXR1P51114 621 aaKnown RBP eCLIP18.67■□□□□ 0.58
CHGA-202ENST00000334654 ORC1Q13415 861 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 PSMD5Q16401 504 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 CCDC142Q17RM4 750 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 CTXN3Q4LDR2 81 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 SMYD5Q6GMV2 418 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 KIAA1841Q6NSI8 718 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 TMC6Q7Z403 805 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 FAM71AQ8IYT1 594 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 CRYBG2Q8N1P7 616 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 MRPL43Q8N983 215 aaKnown RBP18.67■□□□□ 0.58
CHGA-202ENST00000334654 MRPL17Q9NRX2 175 aaKnown RBP18.67■□□□□ 0.58
CHGA-202ENST00000334654 FNIP2Q9P278 1114 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 CAPN11Q9UMQ6 739 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 PCDHB4Q9Y5E5 795 aa18.67■□□□□ 0.58
CHGA-202ENST00000334654 C2orf71A6NGG8 1288 aa18.66■□□□□ 0.58
CHGA-202ENST00000334654 HIDE1A8MVS5 230 aa18.66■□□□□ 0.58
CHGA-202ENST00000334654 H7C4K7 107 aa18.66■□□□□ 0.58
CHGA-202ENST00000334654 CLCN1P35523 988 aa18.66■□□□□ 0.58
CHGA-202ENST00000334654 YWHAEP62258 255 aaKnown RBP18.66■□□□□ 0.58
CHGA-202ENST00000334654 GRIN2CQ14957 1233 aa18.66■□□□□ 0.58
CHGA-202ENST00000334654 ZNF394Q53GI3 561 aa18.66■□□□□ 0.58
CHGA-202ENST00000334654 HABP4Q5JVS0 413 aaKnown RBP18.66■□□□□ 0.58
CHGA-202ENST00000334654 SLC8B1Q6J4K2 584 aa18.66■□□□□ 0.58
CHGA-202ENST00000334654 ZNF280DQ6N043 979 aa18.66■□□□□ 0.58
CHGA-202ENST00000334654 TMEM270Q6UE05 265 aa18.66■□□□□ 0.58
CHGA-202ENST00000334654 THEM5Q8N1Q8 247 aa18.66■□□□□ 0.58
CHGA-202ENST00000334654 TTC39CQ8N584 583 aa18.66■□□□□ 0.58
CHGA-202ENST00000334654 LMAN2LQ9H0V9 348 aa18.66■□□□□ 0.58
CHGA-202ENST00000334654 NGRNQ9NPE2 291 aaKnown RBP18.66■□□□□ 0.58
CHGA-202ENST00000334654 CRTAC1Q9NQ79 661 aa18.66■□□□□ 0.58
CHGA-202ENST00000334654 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.66■□□□□ 0.58
CHGA-202ENST00000334654 SZT2Q5T011 3432 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 CALCAP01258 141 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 CNPP09543 421 aaKnown RBP18.65■□□□□ 0.58
CHGA-202ENST00000334654 OR4Q2P0C623 313 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 CASP14P31944 242 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 PLPP4Q5VZY2 271 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 E4F1Q66K89 784 aaPredicted RBP18.65■□□□□ 0.58
CHGA-202ENST00000334654 FAM171BQ6P995 826 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 PDXDC1Q6P996 788 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 ACOT1Q86TX2 421 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 RBBP8NLQ8NC74 664 aaPredicted RBP18.65■□□□□ 0.58
CHGA-202ENST00000334654 CPLX3Q8WVH0 158 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 IQCDQ96DY2 449 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 TMEM176AQ96HP8 235 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 SYT15Q9BQS2 421 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 NT5C1AQ9BXI3 368 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 ZCWPW1Q9H0M4 648 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 ACP6Q9NPH0 428 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 ENTPD7Q9NQZ7 604 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 TMLHEQ9NVH6 421 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 CDH9Q9ULB4 789 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 PTPRDP23468 1912 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 MYBPHLA2RUH7 354 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 OR6C75A6NL08 312 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 TEX28O15482 410 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 PTPN1P18031 435 aaKnown RBP18.65■□□□□ 0.58
CHGA-202ENST00000334654 PCSK1P29120 753 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 SOX5P35711 763 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 PSMC1P62191 440 aaKnown RBP18.65■□□□□ 0.58
CHGA-202ENST00000334654 SMC1AQ14683 1233 aaKnown RBP18.65■□□□□ 0.58
CHGA-202ENST00000334654 INTS6LQ5JSJ4 861 aaKnown RBP18.65■□□□□ 0.58
CHGA-202ENST00000334654 PDE12Q6L8Q7 609 aaKnown RBP18.65■□□□□ 0.58
CHGA-202ENST00000334654 CACNA2D4Q7Z3S7 1137 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 KLHL5Q96PQ7 755 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 ZSWIM1Q9BR11 485 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 OXCT2Q9BYC2 517 aaPredicted RBP18.65■□□□□ 0.58
CHGA-202ENST00000334654 PRDM12Q9H4Q4 367 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.65■□□□□ 0.58
CHGA-202ENST00000334654 GTF3C4Q9UKN8 822 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 MYO6Q9UM54 1294 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 SSX2IPQ9Y2D8 614 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 CDY1Q9Y6F8 540 aa18.65■□□□□ 0.58
CHGA-202ENST00000334654 PRRC2BQ5JSZ5 2229 aaKnown RBP18.64■□□□□ 0.58
CHGA-202ENST00000334654 LRRC53A6NM62 1247 aa18.64■□□□□ 0.57
CHGA-202ENST00000334654 CYP26A1O43174 497 aa18.64■□□□□ 0.57
CHGA-202ENST00000334654 CSPG5O95196 566 aa18.64■□□□□ 0.57
CHGA-202ENST00000334654 VNN2O95498 520 aa18.64■□□□□ 0.57
CHGA-202ENST00000334654 OR1D2P34982 312 aa18.64■□□□□ 0.57
CHGA-202ENST00000334654 ZBED6P86452 979 aa18.64■□□□□ 0.57
CHGA-202ENST00000334654 ARID5BQ14865 1188 aa18.64■□□□□ 0.57
CHGA-202ENST00000334654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.64■□□□□ 0.57
CHGA-202ENST00000334654 C12orf29Q8N999 325 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms