RNA–Protein interactions for RNA: ENST00000312635.10

USP15-202, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 1 (best) BASIC

Gene USP15, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-202ENST00000312635 MAPRE1Q15691 268 aaKnown RBP9.64□□□□□ -0.87
USP15-202ENST00000312635 CNGA2Q16280 664 aa9.64□□□□□ -0.87
USP15-202ENST00000312635 OVOS1Q6IE37 1185 aa9.64□□□□□ -0.87
USP15-202ENST00000312635 RAD9BQ6WBX8 426 aa9.64□□□□□ -0.87
USP15-202ENST00000312635 OSTM1Q86WC4 334 aa9.64□□□□□ -0.87
USP15-202ENST00000312635 RNF168Q8IYW5 571 aaPredicted RBP9.64□□□□□ -0.87
USP15-202ENST00000312635 SLC30A5Q8TAD4 765 aa9.64□□□□□ -0.87
USP15-202ENST00000312635 ZNF606Q8WXB4 792 aa9.64□□□□□ -0.87
USP15-202ENST00000312635 SAMD11Q96NU1 681 aa9.64□□□□□ -0.87
USP15-202ENST00000312635 GDF15Q99988 308 aa9.64□□□□□ -0.87
USP15-202ENST00000312635 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.64□□□□□ -0.87
USP15-202ENST00000312635 HERC2P3Q9BVR0 1158 aa9.64□□□□□ -0.87
USP15-202ENST00000312635 LHX5Q9H2C1 402 aa9.64□□□□□ -0.87
USP15-202ENST00000312635 PDCL3Q9H2J4 239 aa9.64□□□□□ -0.87
USP15-202ENST00000312635 ZKSCAN5Q9Y2L8 839 aa9.64□□□□□ -0.87
USP15-202ENST00000312635 FNDC1Q4ZHG4 1894 aaPredicted RBP9.64□□□□□ -0.87
USP15-202ENST00000312635 OR6C75A6NL08 312 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 LSM8O95777 96 aaKnown RBP9.63□□□□□ -0.87
USP15-202ENST00000312635 ITGB1P05556 798 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 PLEKP08567 350 aaPredicted RBP9.63□□□□□ -0.87
USP15-202ENST00000312635 CD19P15391 556 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 FMO1Q01740 532 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 PLCB3Q01970 1234 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 KRT17Q04695 432 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 USP41Q3LFD5 358 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 ZNF394Q53GI3 561 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 ANKS3Q6ZW76 656 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 DDX53Q86TM3 631 aaKnown RBP9.63□□□□□ -0.87
USP15-202ENST00000312635 DCP1BQ8IZD4 617 aaKnown RBP9.63□□□□□ -0.87
USP15-202ENST00000312635 HASPINQ8TF76 798 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 TMEM169Q96HH4 297 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 TWNKQ96RR1 684 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 SYT15Q9BQS2 421 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 PLVAPQ9BX97 442 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 UBE2OQ9C0C9 1292 aaKnown RBP9.63□□□□□ -0.87
USP15-202ENST00000312635 KCND1Q9NSA2 647 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 ADAMTS1Q9UHI8 967 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 PUF60Q9UHX1 559 aaKnown RBP9.63□□□□□ -0.87
USP15-202ENST00000312635 INTUQ9ULD6 942 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 SSX2IPQ9Y2D8 614 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 CEP83Q9Y592 693 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 PCDHA11Q9Y5I1 949 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 DDX3XO00571 662 aaKnown RBP eCLIP9.63□□□□□ -0.875e-28■■■□□ 17.3
USP15-202ENST00000312635 ZSCAN12O43309 604 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 SOD2P04179 222 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 CYP1A1P04798 512 aaPredicted RBP9.63□□□□□ -0.87
USP15-202ENST00000312635 MMEP08473 750 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 CCDC175P0C221 793 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 CHRNB2P17787 502 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 PTPN1P18031 435 aaKnown RBP9.63□□□□□ -0.87
USP15-202ENST00000312635 IGFBP6P24592 240 aaPredicted RBP9.63□□□□□ -0.87
USP15-202ENST00000312635 CDH5P33151 784 aaPredicted RBP9.63□□□□□ -0.87
USP15-202ENST00000312635 TSPY1Q01534 308 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 SMARCB1Q12824 385 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 SHHQ15465 462 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 FAM171A1Q5VUB5 890 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 ZNF280DQ6N043 979 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 LCLAT1Q6UWP7 414 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 TMCO2Q7Z6W1 182 aaPredicted RBP9.63□□□□□ -0.87
USP15-202ENST00000312635 ACOT1Q86TX2 421 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 B3GALNT2Q8NCR0 500 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 TMEM35BQ8NCS4 154 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 LNX1Q8TBB1 728 aaPredicted RBP9.63□□□□□ -0.87
USP15-202ENST00000312635 SLC20A1Q8WUM9 679 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 TTPALQ9BTX7 342 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 GPR62Q9BZJ7 368 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 HCSTQ9UBK5 93 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 HMGXB4Q9UGU5 601 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 NENFQ9UMX5 172 aa9.63□□□□□ -0.87
USP15-202ENST00000312635 TRIP11Q15643 1979 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 I3L4J1 428 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 O00370 1275 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 RB1P06400 928 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 SETSIPP0DME0 302 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 BRD2P25440 801 aaKnown RBP9.62□□□□□ -0.87
USP15-202ENST00000312635 LMO2P25791 158 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 TKTP29401 623 aaKnown RBP9.62□□□□□ -0.87
USP15-202ENST00000312635 CREMQ03060 361 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 CLEC16AQ2KHT3 1053 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 INTS6LQ5JSJ4 861 aaKnown RBP9.62□□□□□ -0.87
USP15-202ENST00000312635 C9orf50Q5SZB4 431 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 CCDC122Q5T0U0 273 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 TAF3Q5VWG9 929 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 ALKBH5Q6P6C2 394 aaKnown RBP9.62□□□□□ -0.87
USP15-202ENST00000312635 ZNF662Q6ZS27 426 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 GLYCTKQ8IVS8 523 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 MSANTD4Q8NCY6 345 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 OLIG1Q8TAK6 271 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 HNRNPABQ99729 332 aaKnown RBP9.62□□□□□ -0.87
USP15-202ENST00000312635 HESX1Q9UBX0 185 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 NAGPAQ9UK23 515 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.62□□□□□ -0.87
USP15-202ENST00000312635 LZTS1Q9Y250 596 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 NME7Q9Y5B8 376 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 BACE2Q9Y5Z0 518 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 ADGRG1Q9Y653 693 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 A0A087X0T9 212 aa9.62□□□□□ -0.87
USP15-202ENST00000312635 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.62□□□□□ -0.87
USP15-202ENST00000312635 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.62□□□□□ -0.87
USP15-202ENST00000312635 GOLGA6L9A6NEM1 432 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms