RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 F5H5T6 163 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 CYP3A4P08684 503 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 COMTP21964 271 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 MAP4P27816 1152 aaKnown RBP18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 CDR2Q01850 454 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 MAP2K5Q13163 448 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 GRIK5Q16478 980 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 ZPBP2Q6X784 338 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 AIPL1Q9NZN9 384 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 ESYT3A0FGR9 886 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 ACKR2O00590 384 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 FSCBQ5H9T9 825 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 HABP4Q5JVS0 413 aaKnown RBP18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 RNF135Q8IUD6 432 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 SNTG2Q9NY99 539 aa18.53■□□□□ 0.56
CDC42EP3-201ENST00000295324 CST8O60676 142 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 PHF2O75151 1096 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 LGALS2P05162 132 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 AVPR1AP37288 418 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 MIB1Q86YT6 1006 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 SCFD1Q8WVM8 642 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 USP13Q92995 863 aaPredicted RBP18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 SMAPO00193 183 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 CXCL8P10145 99 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 ESRRAP11474 423 aaPredicted RBP18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 BYSLQ13895 437 aaKnown RBP18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 VSIG10LQ86VR7 867 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 PDCD7Q8N8D1 485 aaKnown RBP18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 ALG6Q9Y672 507 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 CASTOR2A6NHX0 329 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 MAPK13O15264 365 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 AMPD2Q01433 879 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 PDZD8Q8NEN9 1154 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 SYNDIG1Q9H7V2 258 aa18.52■□□□□ 0.56
CDC42EP3-201ENST00000295324 SLITRK3O94933 977 aa18.52■□□□□ 0.55
CDC42EP3-201ENST00000295324 RBP3P10745 1247 aa18.52■□□□□ 0.55
CDC42EP3-201ENST00000295324 PTK2BQ14289 1009 aa18.52■□□□□ 0.55
CDC42EP3-201ENST00000295324 GJB7Q6PEY0 223 aa18.52■□□□□ 0.55
CDC42EP3-201ENST00000295324 CYP39A1Q9NYL5 469 aa18.52■□□□□ 0.55
CDC42EP3-201ENST00000295324 CSDE1O75534 798 aaKnown RBP18.52■□□□□ 0.55
CDC42EP3-201ENST00000295324 NCAPHQ15003 741 aa18.52■□□□□ 0.55
CDC42EP3-201ENST00000295324 OVOS1Q6IE37 1185 aa18.52■□□□□ 0.55
CDC42EP3-201ENST00000295324 TSPAN17Q96FV3 270 aa18.52■□□□□ 0.55
CDC42EP3-201ENST00000295324 TSR3Q9UJK0 312 aaKnown RBP18.52■□□□□ 0.55
CDC42EP3-201ENST00000295324 ZMYM2Q9UBW7 1377 aa18.52■□□□□ 0.55
CDC42EP3-201ENST00000295324 WTIPA6NIX2 430 aaPredicted RBP18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 CFLARO15519 480 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 DDX5P17844 614 aaKnown RBP18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 PON1P27169 355 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 HADHAP40939 763 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 LBRQ14739 615 aaKnown RBP18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 STAT4Q14765 748 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 MEI1Q5TIA1 1274 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 CALML6Q8TD86 181 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 POMCP01189 267 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 STMN1P16949 149 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 CASP4P49662 377 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 ZNF467Q7Z7K2 595 aaPredicted RBP18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 HASPINQ8TF76 798 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 KLHL29Q96CT2 875 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 GPR63Q9BZJ6 419 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 TTLL13PA6NNM8 815 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 FOXN3O00409 490 aaPredicted RBP18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 APBA2Q99767 749 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 HPSEQ9Y251 543 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 TMEM88BA6NKF7 163 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 ITIH2P19823 946 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 ARL4DP49703 201 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 POLD3Q15054 466 aaPredicted RBP18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 RNF168Q8IYW5 571 aaPredicted RBP18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 UPF3AQ9H1J1 476 aaKnown RBP18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 UBR1Q8IWV7 1749 aa18.51■□□□□ 0.55
CDC42EP3-201ENST00000295324 GCKP35557 465 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 BEX3Q00994 111 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 TBCCQ15814 346 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 NT5DC4Q86YG4 428 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 MFN1Q8IWA4 741 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 CLMNQ96JQ2 1002 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 CINPQ9BW66 212 aaPredicted RBP18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 TSPYL2Q9H2G4 693 aaPredicted RBP18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 IPPQ9Y573 584 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 NRCAMQ92823 1304 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 BRAFP15056 766 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 UBA1P22314 1058 aaKnown RBP18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 MYL6P60660 151 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 WNK4Q96J92 1243 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 SENP6Q9GZR1 1112 aaPredicted RBP18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 TRIM33Q9UPN9 1127 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 ANP32DO95626 131 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 GYPCP04921 128 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 MMEP08473 750 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 DNAJB2P25686 324 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 IKBKEQ14164 716 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 PCSK7Q16549 785 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 NAPEPLDQ6IQ20 393 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 FOXP3Q9BZS1 431 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 KRT82Q9NSB4 513 aa18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 KPNA1P52294 538 aaPredicted RBP18.5■□□□□ 0.55
CDC42EP3-201ENST00000295324 PSMC6P62333 389 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms