RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 MIPOL1Q8TD10 442 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 SLC5A5Q92911 643 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 AZIN2Q96A70 460 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 ZNF184Q99676 751 aaPredicted RBP11.09□□□□□ -0.63
ERCC3-201ENST00000285398 GPR88Q9GZN0 384 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 LRRC19Q9H756 370 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 SYNCQ9H7C4 482 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 AGO4Q9HCK5 861 aaKnown RBP11.09□□□□□ -0.63
ERCC3-201ENST00000285398 FBXO40Q9UH90 709 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 ASIC3Q9UHC3 531 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 TMCO1Q9UM00 188 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 SMAPO00193 183 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 EDF1O60869 148 aaKnown RBP11.09□□□□□ -0.63
ERCC3-201ENST00000285398 CCNE2O96020 404 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 MAGEA8P43361 318 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 KCNJ1P48048 391 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 MARCKSL1P49006 195 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 WDR4P57081 412 aaKnown RBP11.09□□□□□ -0.63
ERCC3-201ENST00000285398 ADCY1Q08828 1119 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 TCEAL1Q15170 157 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 GJC2Q5T442 439 aaPredicted RBP11.09□□□□□ -0.63
ERCC3-201ENST00000285398 RHBDF2Q6PJF5 856 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 NCSTNQ92542 709 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 SNF8Q96H20 258 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 DYDC2Q96IM9 177 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 FAM20AQ96MK3 541 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 EIF2AK1Q9BQI3 630 aaKnown RBP11.09□□□□□ -0.63
ERCC3-201ENST00000285398 TAS2R14Q9NYV8 317 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 ZNF212Q9UDV6 495 aa11.09□□□□□ -0.63
ERCC3-201ENST00000285398 LAMA2P24043 3122 aaKnown RBP11.08□□□□□ -0.63
ERCC3-201ENST00000285398 MCM3APO60318 1980 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 SLC25A27O95847 323 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 MUTP22033 750 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 SLC18A1P54219 525 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 KRT17Q04695 432 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 PABPC1LQ4VXU2 614 aaKnown RBP11.08□□□□□ -0.64
ERCC3-201ENST00000285398 SYDE1Q6ZW31 735 aaPredicted RBP11.08□□□□□ -0.64
ERCC3-201ENST00000285398 GPR142Q7Z601 462 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 C10orf82Q8WW14 230 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 NRG4Q8WWG1 115 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 NAP1L4Q99733 375 aaKnown RBP11.08□□□□□ -0.64
ERCC3-201ENST00000285398 REEP2Q9BRK0 252 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 CENPKQ9BS16 269 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 SPATA16Q9BXB7 569 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 PDGFCQ9NRA1 345 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 STX18Q9P2W9 335 aaKnown RBP11.08□□□□□ -0.64
ERCC3-201ENST00000285398 DNAJC12Q9UKB3 198 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 COMMD3-BMI1R4GMX3 469 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 MANSC4A6NHS7 340 aaPredicted RBP11.08□□□□□ -0.64
ERCC3-201ENST00000285398 C2CD2LO14523 706 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 PYGMP11217 842 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 MCL1Q07820 350 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 PDK4Q16654 411 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 LY6KQ17RY6 165 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 CNPY1Q3B7I2 92 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 FYB2Q5VWT5 728 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 TSHZ1Q6ZSZ6 1077 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 HS2ST1Q7LGA3 356 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 PALB2Q86YC2 1186 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 ZNF398Q8TD17 642 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 BTBD10Q9BSF8 475 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 PLVAPQ9BX97 442 aa11.08□□□□□ -0.64
ERCC3-201ENST00000285398 MAP3K20Q9NYL2 800 aaKnown RBP11.08□□□□□ -0.64
ERCC3-201ENST00000285398 A0A0G2JMZ2 1700 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 LCTP09848 1927 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 TMEM110-MUSTN1A8MSY1 372 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 TBX3O15119 743 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 TP73O15350 636 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 SLITRK3O94933 977 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 PSMG1O95456 288 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 COMTP21964 271 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 MAN1A1P33908 653 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 CHKAP35790 457 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 USP4Q13107 963 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 STXBP2Q15833 593 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 UGCGQ16739 394 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 DAB2IPQ5VWQ8 1189 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 ZNF365Q70YC5 407 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 TRAIPQ9BWF2 469 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 TEKT3Q9BXF9 490 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 CADM1Q9BY67 442 aaKnown RBP11.07□□□□□ -0.64
ERCC3-201ENST00000285398 ARHGAP39Q9C0H5 1083 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 MIS12Q9H081 205 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 NINJ2Q9NZG7 142 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 G3BP2Q9UN86 482 aaKnown RBP11.07□□□□□ -0.64
ERCC3-201ENST00000285398 SMG5Q9UPR3 1016 aaKnown RBP11.07□□□□□ -0.64
ERCC3-201ENST00000285398 IVNS1ABPQ9Y6Y0 642 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 PRPF4O43172 522 aaKnown RBP eCLIP11.07□□□□□ -0.64
ERCC3-201ENST00000285398 TBX10O75333 385 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 ARIH2O95376 493 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 GPC5P78333 572 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 KIF22Q14807 665 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 SIX1Q15475 284 aaPredicted RBP11.07□□□□□ -0.64
ERCC3-201ENST00000285398 ACSBG2Q5FVE4 666 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 PHLDB3Q6NSJ2 640 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 RFWD3Q6PCD5 774 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 DSTYKQ6XUX3 929 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 NLRP9Q7RTR0 991 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 CLNKQ7Z7G1 428 aa11.07□□□□□ -0.64
ERCC3-201ENST00000285398 SYT2Q8N9I0 419 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms