RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 C9orf72Q96LT7 481 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 NLRP4Q96MN2 994 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 PWWP2AQ96N64 755 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 DNPEPQ9ULA0 475 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 HSDL1Q3SXM5 330 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 EAPPQ56P03 285 aaPredicted RBP10.88□□□□□ -0.67
LSG1-201ENST00000265245 TFDP3Q5H9I0 405 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 ATF7IP2Q5U623 682 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 SCARA3Q6AZY7 606 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 HIBCHQ6NVY1 386 aaPredicted RBP10.88□□□□□ -0.67
LSG1-201ENST00000265245 SPOCD1Q6ZMY3 1216 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 ANKS1BQ7Z6G8 1248 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 GPR20Q99678 358 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 KDM4CQ9H3R0 1056 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 CTNNAL1Q9UBT7 734 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 NXF1Q9UBU9 619 aaKnown RBP10.88□□□□□ -0.67
LSG1-201ENST00000265245 PCDHGC3Q9UN70 934 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 ACKR2O00590 384 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 NDC80O14777 642 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 SLC25A27O95847 323 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 BRAFP15056 766 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 TCF4P15884 667 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 HNRNPH1P31943 449 aaKnown RBP10.88□□□□□ -0.67
LSG1-201ENST00000265245 MAGEA4P43358 317 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 ARSEP51690 589 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 OSTNP61366 133 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 PLCB3Q01970 1234 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 LRRC14Q15048 493 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 SMYD5Q6GMV2 418 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 CYP4F22Q6NT55 531 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 PLPPR4Q7Z2D5 763 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 PIGWQ7Z7B1 504 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 CFAP57Q96MR6 1250 aa10.88□□□□□ -0.67
LSG1-201ENST00000265245 ELAC2Q9BQ52 826 aaKnown RBP10.88□□□□□ -0.67
LSG1-201ENST00000265245 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.88□□□□□ -0.67
LSG1-201ENST00000265245 IGKV6-21A0A0C4DH24 114 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 ATP2C2O75185 946 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 KRT19P08727 400 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 HOXC6P09630 235 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 CDH5P33151 784 aaPredicted RBP10.87□□□□□ -0.67
LSG1-201ENST00000265245 ZNF252P-AS1Q0IIN9 211 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 LACTB2Q53H82 288 aaPredicted RBP10.87□□□□□ -0.67
LSG1-201ENST00000265245 CELF3Q5SZQ8 465 aaKnown RBP10.87□□□□□ -0.67
LSG1-201ENST00000265245 TSHZ1Q6ZSZ6 1077 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 ANKRD42Q8N9B4 389 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 CCT6BQ92526 530 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 SPATA33Q96N06 139 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 TBK1Q9UHD2 729 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 TCRBV5S1A1TA0A578 114 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 CCT8L1PA6NM43 557 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 DNALI1O14645 258 aaPredicted RBP10.87□□□□□ -0.67
LSG1-201ENST00000265245 MED7O43513 233 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 B4GALT4O60513 344 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 ARIH2O95376 493 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 ABHD2P08910 425 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 SLC26A2P50443 739 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 CYP4A22Q5TCH4 519 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 SULF1Q8IWU6 871 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 ALLCQ8N6M5 410 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 NIPA2Q8N8Q9 360 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 TFAP2BQ92481 460 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 TTC25Q96NG3 672 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 FHDC1Q9C0D6 1143 aaPredicted RBP10.87□□□□□ -0.67
LSG1-201ENST00000265245 NKIRAS1Q9NYS0 192 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 LGALS13Q9UHV8 139 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 AGTPBP1Q9UPW5 1226 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 GOLGA8SH3BPF8 625 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 ABLIM1O14639 778 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 LGR5O75473 907 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 PGK2P07205 417 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 GHRP10912 638 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 PSMA2P25787 234 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 PTPN7P35236 360 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 ASPAP45381 313 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 SCTRP47872 440 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 GPS1Q13098 491 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 KCTD2Q14681 263 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 ZNF667Q5HYK9 610 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 VSTM1Q6UX27 236 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 PRUNE1Q86TP1 453 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 RIBC1Q8N443 379 aaPredicted RBP10.87□□□□□ -0.67
LSG1-201ENST00000265245 ARL10Q8N8L6 244 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 OTUD5Q96G74 571 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 XYLT2Q9H1B5 865 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 ASCC2Q9H1I8 757 aaPredicted RBP10.87□□□□□ -0.67
LSG1-201ENST00000265245 SYNCQ9H7C4 482 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 RPF1Q9H9Y2 349 aaKnown RBP10.87□□□□□ -0.67
LSG1-201ENST00000265245 SAYSD1Q9NPB0 183 aa10.87□□□□□ -0.67
LSG1-201ENST00000265245 DRG1Q9Y295 367 aaKnown RBP10.87□□□□□ -0.67
LSG1-201ENST00000265245 hCG_1818297A0A087WSY0 165 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 DNM1LO00429 736 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 IFNB1P01574 187 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 KRT3P12035 628 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 PROZP22891 400 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 RDXP35241 583 aaKnown RBP10.86□□□□□ -0.67
LSG1-201ENST00000265245 IREB2P48200 963 aaKnown RBP10.86□□□□□ -0.67
LSG1-201ENST00000265245 VCPP55072 806 aaKnown RBP10.86□□□□□ -0.67
LSG1-201ENST00000265245 OGDHQ02218 1023 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 PPP1R15BQ5SWA1 713 aa10.86□□□□□ -0.67
LSG1-201ENST00000265245 ARHGEF18Q6ZSZ5 1173 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms