RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 MIOSQ9NXC5 875 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 XPOTO43592 962 aaKnown RBP20.05■□□□□ 0.8
TRIM47-201ENST00000254816 HCRTO43612 131 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 CEP104O60308 925 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 IGFBP6P24592 240 aaPredicted RBP20.05■□□□□ 0.8
TRIM47-201ENST00000254816 MRPS25P82663 173 aaKnown RBP20.05■□□□□ 0.8
TRIM47-201ENST00000254816 MTFR1Q15390 333 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 GDAP1L1Q96MZ0 367 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 PPP1R10Q96QC0 940 aaKnown RBP20.05■□□□□ 0.8
TRIM47-201ENST00000254816 CYTH4Q9UIA0 394 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 KBTBD13C9JR72 458 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 TUBBP07437 444 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 MMP8P22894 467 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 MARCKSL1P49006 195 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 SOWAHAQ2M3V2 549 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 FAM26DQ5JW98 314 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 LIN9Q5TKA1 542 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 AGMOQ6ZNB7 445 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 C12orf29Q8N999 325 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 SLC43A3Q8NBI5 491 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 BEGAINQ9BUH8 593 aa20.05■□□□□ 0.8
TRIM47-201ENST00000254816 A0A0U1RQG5 324 aaPredicted RBP20.04■□□□□ 0.8
TRIM47-201ENST00000254816 MED7O43513 233 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 LSM8O95777 96 aaKnown RBP20.04■□□□□ 0.8
TRIM47-201ENST00000254816 TNNT3P45378 269 aaPredicted RBP20.04■□□□□ 0.8
TRIM47-201ENST00000254816 C1QBPQ07021 282 aaKnown RBP20.04■□□□□ 0.8
TRIM47-201ENST00000254816 CYP4A22Q5TCH4 519 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 DCAF12L1Q5VU92 463 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 ZNF572Q7Z3I7 529 aaPredicted RBP20.04■□□□□ 0.8
TRIM47-201ENST00000254816 KRT35Q92764 455 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 PBKQ96KB5 322 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 ADAM2Q99965 735 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 TJP2Q9UDY2 1190 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 KPNA7A9QM74 516 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 MICAL2O94851 1124 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 MYBL2P10244 700 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 ATF7P17544 494 aaPredicted RBP20.04■□□□□ 0.8
TRIM47-201ENST00000254816 MAMLD1Q13495 774 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 DSC3Q14574 896 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 ALG3Q92685 438 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 VCPIP1Q96JH7 1222 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 CALR3Q96L12 384 aaKnown RBP20.04■□□□□ 0.8
TRIM47-201ENST00000254816 LPIN3Q9BQK8 851 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 NT5C1AQ9BXI3 368 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 RBM12Q9NTZ6 932 aaKnown RBP20.04■□□□□ 0.8
TRIM47-201ENST00000254816 PHF24Q9UPV7 400 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 PTPN22Q9Y2R2 807 aa20.04■□□□□ 0.8
TRIM47-201ENST00000254816 TARSL2A2RTX5 802 aaKnown RBP20.03■□□□□ 0.8
TRIM47-201ENST00000254816 ARL5CA6NH57 179 aa20.03■□□□□ 0.8
TRIM47-201ENST00000254816 ARVCFO00192 962 aa20.03■□□□□ 0.8
TRIM47-201ENST00000254816 VDRP11473 427 aa20.03■□□□□ 0.8
TRIM47-201ENST00000254816 CYP3A5P20815 502 aa20.03■□□□□ 0.8
TRIM47-201ENST00000254816 CDH5P33151 784 aaPredicted RBP20.03■□□□□ 0.8
TRIM47-201ENST00000254816 ZNF211Q13398 564 aaPredicted RBP20.03■□□□□ 0.8
TRIM47-201ENST00000254816 MBTPS1Q14703 1052 aa20.03■□□□□ 0.8
TRIM47-201ENST00000254816 DAB2IPQ5VWQ8 1189 aa20.03■□□□□ 0.8
TRIM47-201ENST00000254816 TRAF7Q6Q0C0 670 aa20.03■□□□□ 0.8
TRIM47-201ENST00000254816 ACOT1Q86TX2 421 aa20.03■□□□□ 0.8
TRIM47-201ENST00000254816 OR6B3Q8NGW1 331 aa20.03■□□□□ 0.8
TRIM47-201ENST00000254816 UBA3Q8TBC4 463 aa20.03■□□□□ 0.8
TRIM47-201ENST00000254816 DEFB118Q96PH6 123 aa20.03■□□□□ 0.8
TRIM47-201ENST00000254816 RPS6KC1Q96S38 1066 aa20.03■□□□□ 0.8
TRIM47-201ENST00000254816 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.03■□□□□ 0.8
TRIM47-201ENST00000254816 CEP83Q9Y592 693 aa20.03■□□□□ 0.8
TRIM47-201ENST00000254816 SPOPO43791 374 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 TAF6P49848 677 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 SCNN1GP51170 649 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 SGO2Q562F6 1265 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 PLEKHA7Q6IQ23 1121 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 ERICH1Q86X53 443 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 HACE1Q8IYU2 909 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 HDAC7Q8WUI4 952 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 ZNF560Q96MR9 790 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 TSPAN18Q96SJ8 248 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 ZNF518BQ9C0D4 1074 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 DPEP3Q9H4B8 488 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 M0QYV0 167 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 O00370 1275 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 FGFR1P11362 822 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 PTPN20Q4JDL3 420 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 AADACL2Q6P093 401 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 MRPL10Q7Z7H8 261 aaKnown RBP20.02■□□□□ 0.8
TRIM47-201ENST00000254816 SELENOOQ9BVL4 669 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 LHX5Q9H2C1 402 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.02■□□□□ 0.8
TRIM47-201ENST00000254816 RNF14Q9UBS8 474 aa20.02■□□□□ 0.8
TRIM47-201ENST00000254816 CES2O00748 559 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 LILRA4P59901 499 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 RPL7AP62424 266 aaKnown RBP20.01■□□□□ 0.79
TRIM47-201ENST00000254816 KBTBD7Q8WVZ9 684 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 LRRC1Q9BTT6 524 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 FAM49BQ9NUQ9 324 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 VPS18Q9P253 973 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 CALB1P05937 261 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 THP07101 528 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 PDGFRBP09619 1106 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 LMO2P25791 158 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 CNGA2Q16280 664 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 PPP1R2P3Q6NXS1 205 aa20.01■□□□□ 0.79
TRIM47-201ENST00000254816 USP38Q8NB14 1042 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms