RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 KRT72Q14CN4 511 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 GALNT4Q8N4A0 578 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 DDIT4Q9NX09 232 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 GRB10Q13322 594 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 THTPAQ9BU02 230 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 MRPL40Q9NQ50 206 aaKnown RBP19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 PPP1R37O75864 691 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 B3GAT3O94766 335 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 TFRCP02786 760 aaKnown RBP19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 VCAM1P19320 739 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 CCDC157Q569K6 752 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 INPP5DQ92835 1189 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 RIT2Q99578 217 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 MYO3AQ8NEV4 1616 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 NCF1BA6NI72 391 aaPredicted RBP19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 NCF1CA8MVU1 366 aaPredicted RBP19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 NCF1P14598 390 aaPredicted RBP19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 HARS2P49590 506 aaKnown RBP19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 TEDDM1Q5T9Z0 273 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 CCNI2Q6ZMN8 369 aaPredicted RBP19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 ANKRD13AQ8IZ07 590 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 STKLD1Q8NE28 680 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 CERKQ8TCT0 537 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 MTBPQ96DY7 904 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 TUBE1Q9UJT0 475 aa19.51■□□□□ 0.71
SMARCC1-201ENST00000254480 CROCC2H7BZ55 1655 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 USP31Q70CQ4 1352 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 EDRF1Q3B7T1 1238 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 NUDT18Q6ZVK8 323 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 POLR1AO95602 1720 aaPredicted RBP19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 C17orf102A2RUQ5 167 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 H0Y626 953 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 ARIH2O95376 493 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 SLC25A27O95847 323 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 FXR2P51116 673 aaKnown RBP eCLIP19.5■□□□□ 0.714e-7■■■□□ 15.8
SMARCC1-201ENST00000254480 SEC24CP53992 1094 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 STILQ15468 1287 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 NBPF9Q3BBW0 867 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 FBXW10Q5XX13 1052 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 RAB42Q8N4Z0 105 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 BLOC1S5Q8TDH9 187 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 FOPNLQ96NB1 174 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 CBWD1Q9BRT8 395 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 SLC38A7Q9NVC3 462 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 TMEM120BA0PK00 339 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 CHUKO15111 745 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 FKBP9O95302 570 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 AGTP01019 485 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 FKBP9P1Q75LS8 142 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 IL17RAQ96F46 866 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 ZIM3Q96PE6 472 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 TRIM45Q9H8W5 580 aaPredicted RBP19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 TECPR2O15040 1411 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 CEP152O94986 1710 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 C5orf58C9J3I9 102 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 FOXN3O00409 490 aaPredicted RBP19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 PCSK1P29120 753 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 ARL4DP49703 201 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 ERP27Q96DN0 273 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 ERLEC1Q96DZ1 483 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 PACSIN1Q9BY11 444 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 FZD1Q9UP38 647 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 TRAF3IP3Q9Y228 551 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 ITIH6Q6UXX5 1313 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 ABCA6Q8N139 1617 aa19.5■□□□□ 0.71
SMARCC1-201ENST00000254480 PTPN7P35236 360 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 SOAT1P35610 550 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 OVGP1Q12889 678 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 INTS5Q6P9B9 1019 aaKnown RBP19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 CCT8L2Q96SF2 557 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 GPBP1L1Q9HC44 474 aaPredicted RBP19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 ANKS3Q6ZW76 656 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 USP20Q9Y2K6 914 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 ARL2BPQ9Y2Y0 163 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 EIF3DO15371 548 aaKnown RBP eCLIP19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 TAF6P49848 677 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 RARS2Q5T160 578 aaKnown RBP19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 DCP1BQ8IZD4 617 aaKnown RBP19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 CHST13Q8NET6 341 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 CYGBQ8WWM9 190 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 ZNF512BQ96KM6 892 aaPredicted RBP19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 CYP11B2P19099 503 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 CUL2Q13617 745 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 SLC29A2Q14542 456 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 APOL2Q9BQE5 337 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 CATSPERBQ9H7T0 1116 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 KCND2Q9NZV8 630 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 CDH16O75309 829 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 RHOBTB1O94844 696 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 CPT1AP50416 773 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 PWP1Q13610 501 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 PDK1Q15118 436 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 CHI3L2Q15782 390 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 ARMC2Q8NEN0 867 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 WDCPQ9H6R7 721 aa19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.49■□□□□ 0.71
SMARCC1-201ENST00000254480 POLBP06746 335 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 ZNF286BP0CG31 522 aa19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 MZF1P28698 734 aaPredicted RBP19.48■□□□□ 0.71
SMARCC1-201ENST00000254480 BRD8Q9H0E9 1235 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms