RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ISM2Q6H9L7 571 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 FOXR2Q6PJQ5 311 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 SV2AQ7L0J3 742 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 ATAD1Q8NBU5 361 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 TAF4BQ92750 862 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 NXPE3Q969Y0 559 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 XYLT2Q9H1B5 865 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 HCFC1R1Q9NWW0 138 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 KIAA1468Q9P260 1216 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 IGSF9Q9P2J2 1179 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 LIMD1Q9UGP4 676 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 NOTCH4Q99466 2003 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 DOCK8Q8NF50 2099 aa26.08■■□□□ 1.77
SDF2L1-201ENST00000248958 ZNF197O14709 1029 aa26.08■■□□□ 1.77
SDF2L1-201ENST00000248958 SLC16A3O15427 465 aaKnown RBP26.08■■□□□ 1.77
SDF2L1-201ENST00000248958 STX10O60499 249 aa26.08■■□□□ 1.77
SDF2L1-201ENST00000248958 GTF2H1P32780 548 aa26.08■■□□□ 1.77
SDF2L1-201ENST00000248958 ZNF667Q5HYK9 610 aa26.08■■□□□ 1.77
SDF2L1-201ENST00000248958 LRRTM3Q86VH5 581 aa26.08■■□□□ 1.77
SDF2L1-201ENST00000248958 MYADMQ96S97 322 aa26.08■■□□□ 1.77
SDF2L1-201ENST00000248958 CDH9Q9ULB4 789 aa26.08■■□□□ 1.77
SDF2L1-201ENST00000248958 SORCS3Q9UPU3 1222 aa26.08■■□□□ 1.77
SDF2L1-201ENST00000248958 PCDHB5Q9Y5E4 795 aa26.08■■□□□ 1.77
SDF2L1-201ENST00000248958 BICDL2A1A5D9 508 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 N4BP1O75113 896 aaKnown RBP26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 MICAL2O94851 1124 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 LAMP2P13473 410 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 P4HA1P13674 534 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 NTHL1P78549 312 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 ZNF699Q32M78 642 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 C1orf220Q5T0J3 134 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 CYP4A22Q5TCH4 519 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 OSTM1Q86WC4 334 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 KBTBD7Q8WVZ9 684 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 EDAQ92838 391 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 CRISPLD1Q9H336 500 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 CDH7Q9ULB5 785 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 SLC27A5Q9Y2P5 690 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 MRPS23Q9Y3D9 190 aaKnown RBP26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 MYO10Q9HD67 2058 aa26.07■■□□□ 1.76
SDF2L1-201ENST00000248958 BDP1A6H8Y1 2624 aa26.06■■□□□ 1.76
SDF2L1-201ENST00000248958 MTMR3Q13615 1198 aa26.06■■□□□ 1.76
SDF2L1-201ENST00000248958 MAPRE1Q15691 268 aaKnown RBP26.06■■□□□ 1.76
SDF2L1-201ENST00000248958 MGAT5BQ3V5L5 792 aa26.06■■□□□ 1.76
SDF2L1-201ENST00000248958 PDZD4Q76G19 769 aaPredicted RBP26.06■■□□□ 1.76
SDF2L1-201ENST00000248958 ITIH5Q86UX2 942 aa26.06■■□□□ 1.76
SDF2L1-201ENST00000248958 CEP63Q96MT8 703 aa26.06■■□□□ 1.76
SDF2L1-201ENST00000248958 CORO1BQ9BR76 489 aa26.06■■□□□ 1.76
SDF2L1-201ENST00000248958 SNX25Q9H3E2 840 aa26.06■■□□□ 1.76
SDF2L1-201ENST00000248958 TMEM8AQ9HCN3 771 aa26.06■■□□□ 1.76
SDF2L1-201ENST00000248958 ABCB6Q9NP58 842 aa26.06■■□□□ 1.76
SDF2L1-201ENST00000248958 CEP72Q9P209 647 aa26.06■■□□□ 1.76
SDF2L1-201ENST00000248958 TRIM49BA6NDI0 452 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 PPP1R3GB7ZBB8 358 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 GOLGA6L22H0YM25 854 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 BIN1O00499 593 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 CLSTN1O94985 981 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 VNN1O95497 513 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 HAPLN1P10915 354 aaPredicted RBP26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 CD44P16070 742 aaKnown RBP26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 BMP6P22004 513 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 GNL1P36915 607 aaPredicted RBP26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 PMS1P54277 932 aaKnown RBP26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 EPHA5P54756 1037 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 ZXDAP98168 799 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 VEPH1Q14D04 833 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 CAMK4Q16566 473 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 UBALD2Q8IYN6 164 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 FGF13Q92913 245 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 FUBP3Q96I24 572 aaKnown RBP eCLIP26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 PKMYT1Q99640 499 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 IMPG2Q9BZV3 1241 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 ASAH2Q9NR71 780 aa26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 ABI2Q9NYB9 513 aaPredicted RBP26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 NXF1Q9UBU9 619 aaKnown RBP26.05■■□□□ 1.76
SDF2L1-201ENST00000248958 GPR37L1O60883 481 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 TRIM49P0CI25 452 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 TRIM49CP0CI26 452 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 ACAT1P24752 427 aaKnown RBP26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 PIK3CAP42336 1068 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 PRSS36Q5K4E3 855 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 KRT39Q6A163 491 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 FAM171BQ6P995 826 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 C4orf50Q6ZRC1 276 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 FILIP1Q7Z7B0 1213 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 OR6B3Q8NGW1 331 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 ITFG1Q8TB96 612 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 SEPT5Q99719 369 aaPredicted RBP26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 SYT15Q9BQS2 421 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 CLSTN2Q9H4D0 955 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 KCNK12Q9HB15 430 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 METTL14Q9HCE5 456 aaKnown RBP26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 LMBRD1Q9NUN5 540 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 GTF3C4Q9UKN8 822 aa26.04■■□□□ 1.76
SDF2L1-201ENST00000248958 FGF19O95750 216 aa26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 ASS1P00966 412 aaKnown RBP26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 HLA-DRAP01903 254 aa26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 GCLMP48507 274 aa26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 PPP3CAQ08209 521 aa26.03■■□□□ 1.76
SDF2L1-201ENST00000248958 CFAP221Q4G0U5 840 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms