RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 TSG101Q99816 390 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 CRISPLD1Q9H336 500 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 ABCB6Q9NP58 842 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 ASAH2Q9NR71 780 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 ASB3Q9Y575 518 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 HELZP42694 1942 aaKnown RBP13.7□□□□□ -0.22
VPREB3-201ENST00000248948 COL4A2P08572 1712 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 ANHXE9PGG2 379 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 ZNF197O14709 1029 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 PSMA7O14818 248 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 SLC16A3O15427 465 aaKnown RBP13.69□□□□□ -0.22
VPREB3-201ENST00000248948 PHACTR2O75167 634 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 TACC1O75410 805 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 C4BPAP04003 597 aaKnown RBP13.69□□□□□ -0.22
VPREB3-201ENST00000248948 FAM163BP0C2L3 166 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 KRT13P13646 458 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 WARSP23381 471 aaKnown RBP13.69□□□□□ -0.22
VPREB3-201ENST00000248948 PSMC2P35998 433 aaKnown RBP13.69□□□□□ -0.22
VPREB3-201ENST00000248948 PRCPP42785 496 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 ALDH1A3P47895 512 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 TUFMP49411 452 aaKnown RBP13.69□□□□□ -0.22
VPREB3-201ENST00000248948 VAMP7P51809 220 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 EPHB3P54753 998 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 MCCD1P59942 119 aaPredicted RBP13.69□□□□□ -0.22
VPREB3-201ENST00000248948 HTR4Q13639 388 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 SLC5A9Q2M3M2 681 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 ZNF699Q32M78 642 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 PRSS36Q5K4E3 855 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 SCARA3Q6AZY7 606 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 FOXR2Q6PJQ5 311 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 TRIM67Q6ZTA4 783 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 PDZD4Q76G19 769 aaPredicted RBP13.69□□□□□ -0.22
VPREB3-201ENST00000248948 ITIH5Q86UX2 942 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 ADSSL1Q8N142 457 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 TAF4BQ92750 862 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 ZNF512Q96ME7 567 aaPredicted RBP13.69□□□□□ -0.22
VPREB3-201ENST00000248948 PKMYT1Q99640 499 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 XYLT2Q9H1B5 865 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 KCNK12Q9HB15 430 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 GDE1Q9NZC3 331 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 CEP72Q9P209 647 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 MAN1B1Q9UKM7 699 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 DUSP12Q9UNI6 340 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 MRPS23Q9Y3D9 190 aaKnown RBP13.69□□□□□ -0.22
VPREB3-201ENST00000248948 PCDHB5Q9Y5E4 795 aa13.69□□□□□ -0.22
VPREB3-201ENST00000248948 ZNF638Q14966 1978 aaKnown RBP13.69□□□□□ -0.22
VPREB3-201ENST00000248948 CETN3O15182 167 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 FGF19O95750 216 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 CST3P01034 146 aaPredicted RBP13.68□□□□□ -0.22
VPREB3-201ENST00000248948 ASGR2P07307 311 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 EPB41P11171 864 aaKnown RBP13.68□□□□□ -0.22
VPREB3-201ENST00000248948 MYL6P60660 151 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 DLG4P78352 724 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 ADAM9Q13443 819 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 TDGQ13569 410 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 NCOA4Q13772 614 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 VEPH1Q14D04 833 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 MAPRE1Q15691 268 aaKnown RBP13.68□□□□□ -0.22
VPREB3-201ENST00000248948 CFAP221Q4G0U5 840 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 CYP4A22Q5TCH4 519 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 OSTM1Q86WC4 334 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 TMC8Q8IU68 726 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 TTC9BQ8N6N2 239 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 TRIML1Q8N9V2 468 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 ATAD1Q8NBU5 361 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 ITFG1Q8TB96 612 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 ERCC4Q92889 916 aaPredicted RBP13.68□□□□□ -0.22
VPREB3-201ENST00000248948 PSMG2Q969U7 264 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 FUBP3Q96I24 572 aaKnown RBP eCLIP13.68□□□□□ -0.22
VPREB3-201ENST00000248948 SEPT5Q99719 369 aaPredicted RBP13.68□□□□□ -0.22
VPREB3-201ENST00000248948 SYT15Q9BQS2 421 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 CORO1BQ9BR76 489 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 DNAJC25Q9H1X3 360 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 ABI2Q9NYB9 513 aaPredicted RBP13.68□□□□□ -0.22
VPREB3-201ENST00000248948 LIMD1Q9UGP4 676 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 CDH9Q9ULB4 789 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 ANAPC1Q9H1A4 1944 aa13.68□□□□□ -0.22
VPREB3-201ENST00000248948 FAM86C2PA6NEL3 165 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 HAPLN1P10915 354 aaPredicted RBP13.67□□□□□ -0.22
VPREB3-201ENST00000248948 P4HA1P13674 534 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 ATF6P18850 670 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 ACAT1P24752 427 aaKnown RBP13.67□□□□□ -0.22
VPREB3-201ENST00000248948 GTF2H1P32780 548 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 PIK3CAP42336 1068 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 FKBP3Q00688 224 aaKnown RBP13.67□□□□□ -0.22
VPREB3-201ENST00000248948 MORC3Q14149 939 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 WDR72Q3MJ13 1102 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 MGAT5BQ3V5L5 792 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 ZNF667Q5HYK9 610 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 C1orf220Q5T0J3 134 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 C4orf50Q6ZRC1 276 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 SV2AQ7L0J3 742 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 BMP8AQ7Z5Y6 402 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 LRRTM3Q86VH5 581 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 ASIC4Q96FT7 647 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 DHTKD1Q96HY7 919 aaPredicted RBP13.67□□□□□ -0.22
VPREB3-201ENST00000248948 MMS19Q96T76 1030 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 LRFN3Q9BTN0 628 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 IMPG2Q9BZV3 1241 aa13.67□□□□□ -0.22
VPREB3-201ENST00000248948 MYO16Q9Y6X6 1858 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms