RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 CACYBPQ9HB71 228 aaKnown RBP16.54■□□□□ 0.24
SIN3B-201ENST00000248054 MCM8Q9UJA3 840 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 STAG3L1P0CL83 205 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 MARSP56192 900 aaKnown RBP16.54■□□□□ 0.24
SIN3B-201ENST00000248054 ZNF280AP59817 542 aaPredicted RBP16.54■□□□□ 0.24
SIN3B-201ENST00000248054 MAPRE1Q15691 268 aaKnown RBP16.54■□□□□ 0.24
SIN3B-201ENST00000248054 SPATA2LQ8IUW3 424 aaPredicted RBP16.54■□□□□ 0.24
SIN3B-201ENST00000248054 BRSK2Q8IWQ3 736 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 SHCBP1Q8NEM2 672 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 PPP1R2P1Q96PQ5 205 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 MTMR12Q9C0I1 747 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 ITGA11Q9UKX5 1188 aa16.54■□□□□ 0.24
SIN3B-201ENST00000248054 GPR182O15218 404 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 PSMD3O43242 534 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 S100BP04271 92 aaPredicted RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 SPATA31C1P0DKV0 1188 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 AXLP30530 894 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 PPARGP37231 505 aaPredicted RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 PDIA2Q13087 525 aaKnown RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 NFIL3Q16649 462 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 HIF1AQ16665 826 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 MSL3Q8N5Y2 521 aaKnown RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 GDAP1Q8TB36 358 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 PARD3BQ8TEW8 1205 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 ARHGEF26Q96DR7 871 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 EHD2Q9NZN4 543 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 BFARQ9NZS9 450 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 VAV3Q9UKW4 847 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 PPP1R11O60927 126 aaPredicted RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 GNL1P36915 607 aaPredicted RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 AGBL2Q5U5Z8 902 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 IQSEC1Q6DN90 963 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 GLB1LQ6UWU2 654 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 EPM2AIP1Q7L775 607 aaPredicted RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 ST13P4Q8IZP2 240 aaPredicted RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 AFG1LQ8WV93 481 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 SOCS4Q8WXH5 440 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 HDAC11Q96DB2 347 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 NUDCD1Q96RS6 583 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 CENPKQ9BS16 269 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 MAGEB5Q9BZ81 275 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 DNAJC17Q9NVM6 304 aaKnown RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 PHF20L1A8MW92 1017 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 MX2P20592 715 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 CLK2P49760 499 aaKnown RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 SULT1E1P49888 294 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 C1QBPQ07021 282 aaKnown RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 CLEC16AQ2KHT3 1053 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 DCP1BQ8IZD4 617 aaKnown RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 MTMR8Q96EF0 704 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 VPS39Q96JC1 886 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 ROPN1BQ9BZX4 212 aaPredicted RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 ROPN1Q9HAT0 212 aaPredicted RBP16.53■□□□□ 0.24
SIN3B-201ENST00000248054 SPATA31C2B4DYI2 1134 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 F8W8V4 182 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 SPECC1L-ADORA2AF8WAN1 911 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 COPEO14579 308 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 MCL1Q07820 350 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 FSCBQ5H9T9 825 aa16.53■□□□□ 0.24
SIN3B-201ENST00000248054 SPAG6O75602 509 aa16.52■□□□□ 0.24
SIN3B-201ENST00000248054 LY6KQ17RY6 165 aa16.52■□□□□ 0.24
SIN3B-201ENST00000248054 TAF1BQ53T94 588 aaPredicted RBP16.52■□□□□ 0.24
SIN3B-201ENST00000248054 GLIS2Q9BZE0 524 aaPredicted RBP16.52■□□□□ 0.24
SIN3B-201ENST00000248054 TTC7AQ9ULT0 858 aaPredicted RBP16.52■□□□□ 0.24
SIN3B-201ENST00000248054 SPDYE16A6NNV3 312 aaPredicted RBP16.52■□□□□ 0.24
SIN3B-201ENST00000248054 GOLGA7BQ2TAP0 167 aa16.52■□□□□ 0.24
SIN3B-201ENST00000248054 KDM7AQ6ZMT4 941 aa16.52■□□□□ 0.24
SIN3B-201ENST00000248054 CAND2O75155 1236 aa16.52■□□□□ 0.23
SIN3B-201ENST00000248054 ANP32DO95626 131 aa16.52■□□□□ 0.23
SIN3B-201ENST00000248054 INSRRP14616 1297 aa16.52■□□□□ 0.23
SIN3B-201ENST00000248054 UBA1P22314 1058 aaKnown RBP16.52■□□□□ 0.23
SIN3B-201ENST00000248054 COILP38432 576 aaPredicted RBP16.52■□□□□ 0.23
SIN3B-201ENST00000248054 COPS2P61201 443 aa16.52■□□□□ 0.23
SIN3B-201ENST00000248054 C12orf56Q8IXR9 622 aa16.52■□□□□ 0.23
SIN3B-201ENST00000248054 ZBED8Q8IZ13 594 aa16.52■□□□□ 0.23
SIN3B-201ENST00000248054 PCSK9Q8NBP7 692 aaKnown RBP16.52■□□□□ 0.23
SIN3B-201ENST00000248054 TFR2Q9UP52 801 aa16.52■□□□□ 0.23
SIN3B-201ENST00000248054 CNTN2Q02246 1040 aa16.52■□□□□ 0.23
SIN3B-201ENST00000248054 MIIPQ5JXC2 388 aa16.52■□□□□ 0.23
SIN3B-201ENST00000248054 C4orf50Q6ZRC1 276 aa16.52■□□□□ 0.23
SIN3B-201ENST00000248054 C1orf131Q8NDD1 294 aaKnown RBP16.52■□□□□ 0.23
SIN3B-201ENST00000248054 TRIM15Q9C019 465 aa16.52■□□□□ 0.23
SIN3B-201ENST00000248054 PLEKHA5Q9HAU0 1116 aa16.52■□□□□ 0.23
SIN3B-201ENST00000248054 MGEA5O60502 916 aa16.51■□□□□ 0.23
SIN3B-201ENST00000248054 HNRNPH3P31942 346 aaKnown RBP16.51■□□□□ 0.23
SIN3B-201ENST00000248054 NDUFAF2Q8N183 169 aa16.51■□□□□ 0.23
SIN3B-201ENST00000248054 KRT35Q92764 455 aa16.51■□□□□ 0.23
SIN3B-201ENST00000248054 INTS13Q9NVM9 706 aa16.51■□□□□ 0.23
SIN3B-201ENST00000248054 PAK5Q9P286 719 aa16.51■□□□□ 0.23
SIN3B-201ENST00000248054 TCHHQ07283 1943 aa16.51■□□□□ 0.23
SIN3B-201ENST00000248054 ITGB5P18084 799 aa16.51■□□□□ 0.23
SIN3B-201ENST00000248054 SAT1P21673 171 aa16.51■□□□□ 0.23
SIN3B-201ENST00000248054 SCTRP47872 440 aa16.51■□□□□ 0.23
SIN3B-201ENST00000248054 NME3Q13232 169 aa16.51■□□□□ 0.23
SIN3B-201ENST00000248054 P3H1Q32P28 736 aa16.51■□□□□ 0.23
SIN3B-201ENST00000248054 NBPF20Q3BBV1 942 aa16.51■□□□□ 0.23
SIN3B-201ENST00000248054 CELF3Q5SZQ8 465 aaKnown RBP16.51■□□□□ 0.23
SIN3B-201ENST00000248054 SH3BP5LQ7L8J4 393 aa16.51■□□□□ 0.23
SIN3B-201ENST00000248054 PLPPR4Q7Z2D5 763 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms