RNA–Protein interactions for RNA: ENST00000216121.11

NIPSNAP1-201, Transcript of nipsnap homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP1, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-201ENST00000216121 NKD2Q969F2 451 aaPredicted RBP23.28■■□□□ 1.32
NIPSNAP1-201ENST00000216121 CFAP57Q96MR6 1250 aa23.28■■□□□ 1.32
NIPSNAP1-201ENST00000216121 PTPRHQ9HD43 1115 aa23.28■■□□□ 1.32
NIPSNAP1-201ENST00000216121 TBK1Q9UHD2 729 aa23.28■■□□□ 1.32
NIPSNAP1-201ENST00000216121 TPX2Q9ULW0 747 aaKnown RBP23.28■■□□□ 1.32
NIPSNAP1-201ENST00000216121 SLC12A4Q9UP95 1085 aa23.28■■□□□ 1.32
NIPSNAP1-201ENST00000216121 LRRC37A2A6NM11 1700 aa23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 ZSCAN5DPP0CG00 497 aa23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 MARK3P27448 753 aa23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 TMEM63BQ5T3F8 832 aa23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 TSHZ1Q6ZSZ6 1077 aa23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 EEPD1Q7L9B9 569 aa23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 MAML1Q92585 1016 aa23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 TTC25Q96NG3 672 aa23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 GPR20Q99678 358 aa23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 SAYSD1Q9NPB0 183 aa23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 FGFR1OP2Q9NVK5 253 aa23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 HAUS2Q9NVX0 235 aa23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 STRIP2Q9ULQ0 834 aa23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 USP15Q9Y4E8 981 aaPredicted RBP23.27■■□□□ 1.32
NIPSNAP1-201ENST00000216121 B4GALT4O60513 344 aa23.27■■□□□ 1.31
NIPSNAP1-201ENST00000216121 ITGAVP06756 1048 aa23.27■■□□□ 1.31
NIPSNAP1-201ENST00000216121 MNAT1P51948 309 aa23.27■■□□□ 1.31
NIPSNAP1-201ENST00000216121 SF3A3Q12874 501 aaKnown RBP eCLIP23.27■■□□□ 1.312e-6■■□□□ 13.6
NIPSNAP1-201ENST00000216121 MORF4L2Q15014 288 aa23.27■■□□□ 1.31
NIPSNAP1-201ENST00000216121 SWT1Q5T5J6 900 aaKnown RBP23.27■■□□□ 1.31
NIPSNAP1-201ENST00000216121 CYP4F22Q6NT55 531 aa23.27■■□□□ 1.31
NIPSNAP1-201ENST00000216121 MPZL3Q6UWV2 235 aa23.27■■□□□ 1.31
NIPSNAP1-201ENST00000216121 POLNQ7Z5Q5 900 aa23.27■■□□□ 1.31
NIPSNAP1-201ENST00000216121 LRRC71Q8N4P6 559 aa23.27■■□□□ 1.31
NIPSNAP1-201ENST00000216121 ARIH2O95376 493 aa23.26■■□□□ 1.31
NIPSNAP1-201ENST00000216121 GPS1Q13098 491 aa23.26■■□□□ 1.31
NIPSNAP1-201ENST00000216121 CYP4A22Q5TCH4 519 aa23.26■■□□□ 1.31
NIPSNAP1-201ENST00000216121 ARHGEF18Q6ZSZ5 1173 aa23.26■■□□□ 1.31
NIPSNAP1-201ENST00000216121 PLPPR4Q7Z2D5 763 aa23.26■■□□□ 1.31
NIPSNAP1-201ENST00000216121 SRRM1Q8IYB3 904 aaKnown RBP23.26■■□□□ 1.31
NIPSNAP1-201ENST00000216121 SGSM3Q96HU1 749 aa23.26■■□□□ 1.31
NIPSNAP1-201ENST00000216121 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.26■■□□□ 1.312e-6■■□□□ 13.8
NIPSNAP1-201ENST00000216121 LRRD1A4D1F6 860 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 ACKR2O00590 384 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 GH1P01241 217 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 TNNC2P02585 160 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 ETS1P14921 441 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 YWHAEP62258 255 aaKnown RBP23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 HSDL1Q3SXM5 330 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 CYB5D1Q6P9G0 228 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 SCARA5Q6ZMJ2 495 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 LHX5Q9H2C1 402 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 MLXIPLQ9NP71 852 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 EFR3BQ9Y2G0 817 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 ANK1P16157 1881 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 PECAM1P16284 738 aaPredicted RBP23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 MKRN3Q13064 507 aaKnown RBP23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 WDR72Q3MJ13 1102 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 NUGGCQ68CJ6 796 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 DENND1BQ6P3S1 775 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 TRIM50Q86XT4 487 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 TDRPQ86YL5 185 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 CNKSR2Q8WXI2 1034 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 ANKRD36BP1Q96IX9 119 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 FZD8Q9H461 694 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 NKIRAS1Q9NYS0 192 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 CD2APQ9Y5K6 639 aa23.25■■□□□ 1.31
NIPSNAP1-201ENST00000216121 C3orf70A6NLC5 250 aaPredicted RBP23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 SIGLEC16A6NMB1 481 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 SOCS7O14512 581 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 NDC80O14777 642 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 POLR2BP30876 1174 aaKnown RBP23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 NR1H3Q13133 447 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 CELF3Q5SZQ8 465 aaKnown RBP23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 RNASEH2BQ5TBB1 312 aaKnown RBP23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 ATF7IP2Q5U623 682 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 PPP1R21Q6ZMI0 780 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 THNSL1Q8IYQ7 743 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 SLC35B2Q8TB61 432 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 ACSF2Q96CM8 615 aaPredicted RBP23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 MAGEB18Q96M61 343 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 PCDH9Q9HC56 1237 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 SUN1O94901 812 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 GCAP28676 217 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 STX2P32856 288 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 RFC1P35251 1148 aaPredicted RBP23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 LACTBP83111 547 aaPredicted RBP23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 PTPN20Q4JDL3 420 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 RHPN2Q8IUC4 686 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 GDAP1Q8TB36 358 aa23.24■■□□□ 1.31
NIPSNAP1-201ENST00000216121 MGAMO43451 1857 aa23.23■■□□□ 1.31
NIPSNAP1-201ENST00000216121 EXOC1LA0A1B0GW35 172 aa23.23■■□□□ 1.31
NIPSNAP1-201ENST00000216121 RASA4BC9J798 803 aa23.23■■□□□ 1.31
NIPSNAP1-201ENST00000216121 ALOX15BO15296 676 aa23.23■■□□□ 1.31
NIPSNAP1-201ENST00000216121 RASA4O43374 803 aa23.23■■□□□ 1.31
NIPSNAP1-201ENST00000216121 FNIP1Q8TF40 1166 aa23.23■■□□□ 1.31
NIPSNAP1-201ENST00000216121 ABCF3Q9NUQ8 709 aa23.23■■□□□ 1.31
NIPSNAP1-201ENST00000216121 SHOC2Q9UQ13 582 aa23.23■■□□□ 1.31
NIPSNAP1-201ENST00000216121 NOP56O00567 594 aaKnown RBP23.23■■□□□ 1.31
NIPSNAP1-201ENST00000216121 KRT3P12035 628 aa23.23■■□□□ 1.31
NIPSNAP1-201ENST00000216121 PSMA2P25787 234 aa23.23■■□□□ 1.31
NIPSNAP1-201ENST00000216121 GTF2A1P52655 376 aaPredicted RBP23.23■■□□□ 1.31
NIPSNAP1-201ENST00000216121 SLC25A11Q02978 314 aaKnown RBP23.23■■□□□ 1.31
NIPSNAP1-201ENST00000216121 TMED2Q15363 201 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms