RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Mroh4G3X8W1 983 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gsg1l2M0QWL6 290 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Dpysl4O35098 572 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Brcc3P46737 291 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Nlrc4Q3UP24 1024 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 IbspQ61711 324 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Trim21Q62191 470 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cd300lfQ6SJQ7 337 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 GancQ8BVW0 898 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Unc45bQ8CGY6 931 aaKnown RBP9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Them5Q9CQJ0 248 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Med7Q9CZB6 233 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tnni1Q9WUZ5 187 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Zscan4-ps1A0A1C7CYV3 506 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Zscan4dA7KBS4 506 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 PrphP15331 475 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gdf6P43028 454 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Rhox5P52651 210 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Slc12a1P55014 1095 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Wdr41Q3UDP0 460 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cyp2j11Q3UNV2 504 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Zscan4fQ3URS2 506 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Scube3Q66PY1 993 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Stk40Q7TNL3 435 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Zscan4cQ80VJ6 506 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Arhgap15Q811M1 481 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Lig4Q8BTF7 911 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Brat1Q8C3R1 822 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 FcrlaQ920A9 352 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ubxn6Q99PL6 442 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 CactinQ9CS00 772 aaKnown RBP9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 PigoQ9JJI6 1093 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Homer2Q9QWW1 354 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Iigp1Q9QZ85 413 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Kcnd2Q9Z0V2 630 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Wdr81Q5ND34 1934 aa9.22□□□□□ -0.93
Trim39-201ENSMUST00000042717 Arid2E9Q7E2 1828 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 Nkx1-1G3UXB3 402 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 Smarcad1Q04692 1021 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cul4aQ3TCH7 759 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 Olfr1105Q7TR58 312 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 Fnbp1Q80TY0 616 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 Arhgap11aQ80Y19 987 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ublcp1Q8BGR9 318 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 Adgrg2Q8CJ12 1009 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tbc1d22aQ8R5A6 516 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tmem86aQ9D8N3 241 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 Llcfc1Q9D9P8 108 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 PalmdQ9JHU2 551 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 Galk1Q9R0N0 392 aa9.21□□□□□ -0.93
Trim39-201ENSMUST00000042717 Top6blJ3QMY9 579 aa9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 Lamp2P17047 415 aa9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gbp1Q01514 589 aa9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ect2Q07139 913 aa9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 Phactr1Q2M3X8 580 aa9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tars2Q3UQ84 723 aaKnown RBP9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 Adcy2Q80TL1 1090 aa9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 Map3k11Q80XI6 850 aa9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 1700001K19RikQ80ZT1 219 aa9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 Zdhhc19Q810M5 347 aa9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 Pcdhb2Q91Y00 799 aa9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 PawrQ925B0 333 aa9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 Oxct1Q9D0K2 520 aaKnown RBP9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 Extl1Q9JKV7 669 aa9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gabbr1Q9WV18 960 aa9.21□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mup10A2BIN1 180 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mup14A2CEK7 180 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Dennd5bA2RSQ0 1274 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mup19A9C497 187 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mup15A9R9W0 180 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm14525B1AZA0 212 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm2012B1B0R1 212 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mup17B5X0G2 180 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Acp4D3YTS9 425 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mup8E9PVW0 235 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Apol11aE9PZG0 334 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mup7E9QA79 235 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Pbx3O35317 434 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 P01644 108 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 P01645 108 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 P01646 108 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 P01647 108 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mup6P02762 180 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mup1P11588 180 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mup2P11589 180 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Fam167bP17257 162 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Znf235Q61116 645 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm14819Q62478 212 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Prl3a1Q78Y73 227 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 MogsQ80UM7 834 aaKnown RBP9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Prr11Q8BHE0 368 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Cnksr3Q8BMA3 555 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Epc1Q8C9X6 813 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Abi1Q8CBW3 481 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Epn2Q8CHU3 595 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Creld2Q9CYA0 350 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ddx56Q9D0R4 546 aaKnown RBP9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Noxred1Q9D3S5 366 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 IvdQ9JHI5 424 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Grk1Q9WVL4 564 aa9.2□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms