RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 HOXA6P31267 233 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 EPHA5P54756 1037 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 CREMQ03060 361 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 EHHADHQ08426 723 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 DPYDQ12882 1025 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 TUSC3Q13454 348 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 PNOCQ13519 176 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 GRM2Q14416 872 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 ACAP1Q15027 740 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 PPP2R5AQ15172 486 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 SF3A2Q15428 464 aaKnown RBP8.07□□□□□ -1.12
PHGDH-225ENST00000641720 UVSSAQ2YD98 709 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 FAM78AQ5JUQ0 283 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 PPM1LQ5SGD2 360 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 NOTUMQ6P988 496 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 ELMSAN1Q6PJG2 1045 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 TXNDC11Q6PKC3 985 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 ZNF852Q6ZMS4 543 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 MYCT1Q8N699 235 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 TMEM161BQ8NDZ6 487 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 GPT2Q8TD30 523 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 HASPINQ8TF76 798 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 SPIRE2Q8WWL2 714 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 ERCC4Q92889 916 aaPredicted RBP8.07□□□□□ -1.12
PHGDH-225ENST00000641720 SECISBP2LQ93073 1101 aaKnown RBP8.07□□□□□ -1.12
PHGDH-225ENST00000641720 MCRS1Q96EZ8 462 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 DDX27Q96GQ7 796 aaKnown RBP8.07□□□□□ -1.12
PHGDH-225ENST00000641720 IFT74Q96LB3 600 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 ZSWIM3Q96MP5 696 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 TTPALQ9BTX7 342 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 MKNK1Q9BUB5 465 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 LSM14BQ9BX40 385 aaKnown RBP8.07□□□□□ -1.12
PHGDH-225ENST00000641720 LRRC3Q9BY71 257 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 IKZF4Q9H2S9 585 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 TRPV4Q9HBA0 871 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 KMT5AQ9NQR1 393 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 PANK4Q9NVE7 773 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 GDE1Q9NZC3 331 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 TBC1D7Q9P0N9 293 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 ZMIZ1Q9ULJ6 1067 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 MYH10P35580 1976 aa8.07□□□□□ -1.12
PHGDH-225ENST00000641720 WDR27A2RRH5 827 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 CASTOR2A6NHX0 329 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 ASAP2O43150 1006 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 PPP1R37O75864 691 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 EPN2O95208 641 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 KCNK5O95279 499 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 VNN2O95498 520 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 TOP3BO95985 862 aaKnown RBP8.06□□□□□ -1.12
PHGDH-225ENST00000641720 PRKCBP05771 671 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 ZNF806P0C7X5 589 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 GAP43P17677 238 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 CCR3P51677 355 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 MLLT6P55198 1093 aaPredicted RBP8.06□□□□□ -1.12
PHGDH-225ENST00000641720 SIM2Q14190 667 aaPredicted RBP8.06□□□□□ -1.12
PHGDH-225ENST00000641720 POSTNQ15063 836 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 PCBP1Q15365 356 aaKnown RBP eCLIP8.06□□□□□ -1.12
PHGDH-225ENST00000641720 CCDC6Q16204 474 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 ZC2HC1CQ53FD0 456 aaPredicted RBP8.06□□□□□ -1.12
PHGDH-225ENST00000641720 NT5DC1Q5TFE4 455 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 FAM171A1Q5VUB5 890 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 EEF1DP3Q658K8 133 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 PKN3Q6P5Z2 889 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 UNQ6494/PRO21346Q6UXR6 183 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 UNC13DQ70J99 1090 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 RTL10Q7L3V2 364 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 ZBTB8OSQ8IWT0 167 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 SPEM1Q8N4L4 309 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 TIGD1Q96MW7 591 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 LRRC3BQ96PB8 259 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 C2orf40Q9H1Z8 148 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 FZD8Q9H461 694 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 C17orf75Q9HAS0 396 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 LMAN1LQ9HAT1 526 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 OLFML3Q9NRN5 406 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 RBM12Q9NTZ6 932 aaKnown RBP8.06□□□□□ -1.12
PHGDH-225ENST00000641720 KLK14Q9P0G3 267 aa8.06□□□□□ -1.12
PHGDH-225ENST00000641720 LARSQ9P2J5 1176 aaKnown RBP8.06□□□□□ -1.12
PHGDH-225ENST00000641720 NDRG2Q9UN36 371 aaKnown RBP8.06□□□□□ -1.12
PHGDH-225ENST00000641720 KNL1Q8NG31 2342 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 PTPRQQ9UMZ3 2332 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 TISP43B9A030 160 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 GIPC1O14908 333 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 NCAM2O15394 837 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 MEFVO15553 781 aaPredicted RBP8.05□□□□□ -1.12
PHGDH-225ENST00000641720 TRAK2O60296 914 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 XYLBO75191 536 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 MICAL2O94851 1124 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 ERLIN2O94905 339 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 SEC24AO95486 1093 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 NPTXRO95502 500 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 TKTP29401 623 aaKnown RBP8.05□□□□□ -1.12
PHGDH-225ENST00000641720 MCM4P33991 863 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 CNR2P34972 360 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 OR1D2P34982 312 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 HOXD13P35453 343 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 VASPP50552 380 aaPredicted RBP8.05□□□□□ -1.12
PHGDH-225ENST00000641720 EFNA5P52803 228 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 NRLP54845 237 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 AMPD3Q01432 767 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms