RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CEP57L1Q8IYX8 460 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 URGCPQ8TCY9 931 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 STK35Q8TDR2 534 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 GATAD2BQ8WXI9 593 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 TIGD1Q96MW7 591 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 PDCL3Q9H2J4 239 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 KCNK12Q9HB15 430 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 FAM105AQ9NUU6 356 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 FAN1Q9Y2M0 1017 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 DOCK6Q96HP0 2047 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 B4GALT3O60512 393 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 URODP06132 367 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 CNPP09543 421 aaKnown RBP5.3□□□□□ -1.56
LINC00550-201ENST00000629293 EDN3P14138 238 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 PFKFB1P16118 471 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 POLGP54098 1239 aaPredicted RBP5.3□□□□□ -1.56
LINC00550-201ENST00000629293 CYP4A11Q02928 519 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 CLCQ05315 142 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 ANGPT1Q15389 498 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 LETM2Q2VYF4 491 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 GET4Q7L5D6 327 aaPredicted RBP5.3□□□□□ -1.56
LINC00550-201ENST00000629293 NIPA1Q7RTP0 329 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 CACTINQ8WUQ7 758 aaKnown RBP5.3□□□□□ -1.56
LINC00550-201ENST00000629293 TRIM6Q9C030 488 aaPredicted RBP5.3□□□□□ -1.56
LINC00550-201ENST00000629293 MAN1C1Q9NR34 630 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 MRPL17Q9NRX2 175 aaKnown RBP5.3□□□□□ -1.56
LINC00550-201ENST00000629293 PCDHB2Q9Y5E7 798 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 ASXL3Q9C0F0 2248 aa5.3□□□□□ -1.56
LINC00550-201ENST00000629293 A0A087WWV3 80 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CCDC195A0A1B0GUA6 201 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 F8W810 466 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 GOLGA6L19H0YKK7 550 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 hCG_1984214I3L0E3 225 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 INO80B-WBP1J3KQ70 363 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 EOMESO95936 686 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 ALDH2P05091 517 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CTSAP10619 480 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 IFNAR1P17181 557 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 RPL17P18621 184 aaKnown RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 TDGQ13569 410 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 KCNC3Q14003 757 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 C2orf27AQ580R0 203 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 RNF187Q5TA31 235 aaPredicted RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 NLRP8Q86W28 1048 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 ZNF713Q8N859 430 aaPredicted RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CCDC148Q8NFR7 591 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 HASPINQ8TF76 798 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 SLC7A3Q8WY07 619 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 SMG7Q92540 1137 aaKnown RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 NKD1Q969G9 470 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 NXPE3Q969Y0 559 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CEP170P1Q96L14 293 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 ZFP42Q96MM3 310 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CCDC43Q96MW1 224 aaKnown RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 EMILIN2Q9BXX0 1053 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 TRIM55Q9BYV6 548 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 INO80BQ9C086 356 aaPredicted RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 ZMYND12Q9H0C1 365 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 ZBP1Q9H171 429 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 POLMQ9NP87 494 aaPredicted RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 KCND1Q9NSA2 647 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CACNG4Q9UBN1 327 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 FAM208BQ5VWN6 2430 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 DDHD2O94830 711 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 ERLIN2O94905 339 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 ZNF202O95125 648 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 JAK3P52333 1124 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 NCAPHQ15003 741 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 PTPN14Q15678 1187 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 INF2Q27J81 1249 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 DPCR1Q3MIW9 517 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 XKR3Q5GH77 459 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CPLX2Q6PUV4 134 aaKnown RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 TMEM184AQ6ZMB5 413 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 MAEAQ7L5Y9 396 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CEP57Q86XR8 500 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 TRIM22Q8IYM9 498 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 AOPEPQ8N6M6 819 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 RNF149Q8NC42 400 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 GAD1Q99259 594 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 RSAD1Q9HA92 442 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 POLR3KQ9Y2Y1 108 aaPredicted RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 FNDC1Q4ZHG4 1894 aaPredicted RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 NEMFO60524 1076 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CYP3A4P08684 503 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CD72P21854 359 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 MLH1P40692 756 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 SCNN1GP51170 649 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 NLRP12P59046 1061 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CCZ1BP86790 482 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 CCZ1P86791 482 aaPredicted RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 FOXC1Q12948 553 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 DNTTIP2Q5QJE6 756 aaKnown RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 RESP18Q5W5W9 173 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 SHC4Q6S5L8 630 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 TAS1R1Q7RTX1 841 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 LYSMD3Q7Z3D4 306 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 MTERF4Q7Z6M4 381 aaKnown RBP5.29□□□□□ -1.56
LINC00550-201ENST00000629293 LRRC8AQ8IWT6 810 aa5.29□□□□□ -1.56
LINC00550-201ENST00000629293 DCLK2Q8N568 766 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms