RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 GLT1D1Q96MS3 346 aa11.2□□□□□ -0.62
VPS11-208ENST00000621676 TIPINQ9BVW5 301 aa11.2□□□□□ -0.62
VPS11-208ENST00000621676 CALN1Q9BXU9 219 aa11.2□□□□□ -0.62
VPS11-208ENST00000621676 ELOVL4Q9GZR5 314 aa11.2□□□□□ -0.62
VPS11-208ENST00000621676 NIF3L1Q9GZT8 377 aa11.2□□□□□ -0.62
VPS11-208ENST00000621676 CCDC113Q9H0I3 377 aa11.2□□□□□ -0.62
VPS11-208ENST00000621676 ARFGAP3Q9NP61 516 aa11.2□□□□□ -0.62
VPS11-208ENST00000621676 PADI3Q9ULW8 664 aa11.2□□□□□ -0.62
VPS11-208ENST00000621676 IPPQ9Y573 584 aa11.2□□□□□ -0.62
VPS11-208ENST00000621676 IGKV6-21A0A0C4DH24 114 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 SMIM28A0A1B0GU29 152 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 TLDC2A0PJX2 215 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 GOLGA8MH3BSY2 632 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 GPR32O75388 356 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 CHRNA1P02708 482 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 ITGB1P05556 798 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 FAM153BP0C7A2 387 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 MCL1Q07820 350 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 FAM153CQ494X1 144 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 CFAP221Q4G0U5 840 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 WSCD1Q658N2 575 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 TSHZ1Q6ZSZ6 1077 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 TMC2Q8TDI7 906 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 UNC93B1Q9H1C4 597 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 STARD7Q9NQZ5 370 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 FAM153AQ9UHL3 310 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 PCDHB2Q9Y5E7 798 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 LRRD1A4D1F6 860 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 ANKRD62A6NC57 917 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 CTIFO43310 598 aaKnown RBP11.19□□□□□ -0.62
VPS11-208ENST00000621676 SOAT2O75908 522 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 CLCNKBP51801 687 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
VPS11-208ENST00000621676 SGSM1Q2NKQ1 1148 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 PPP1R26Q5T8A7 1209 aaPredicted RBP11.19□□□□□ -0.62
VPS11-208ENST00000621676 FAM102AQ5T9C2 384 aaPredicted RBP11.19□□□□□ -0.62
VPS11-208ENST00000621676 NOTUMQ6P988 496 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 ZPBP2Q6X784 338 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 CCDC105Q8IYK2 499 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 RFFLQ8WZ73 363 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 RNPC3Q96LT9 517 aaKnown RBP11.19□□□□□ -0.62
VPS11-208ENST00000621676 CPXM1Q96SM3 734 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 CYTH4Q9UIA0 394 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 TNFSF13BQ9Y275 285 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 BZW2Q9Y6E2 419 aaKnown RBP11.19□□□□□ -0.62
VPS11-208ENST00000621676 ADGRA2Q96PE1 1338 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 RAD51CO43502 376 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 MGEA5O60502 916 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 ASS1P00966 412 aaKnown RBP11.19□□□□□ -0.62
VPS11-208ENST00000621676 RFC1P35251 1148 aaPredicted RBP11.19□□□□□ -0.62
VPS11-208ENST00000621676 ADCY2Q08462 1091 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 ST6GALNAC4Q9H4F1 302 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 TMEM134Q9H6X4 195 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 PTPRFP10586 1907 aa11.19□□□□□ -0.62
VPS11-208ENST00000621676 A0A1B0GUA9 196 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 ABLIM1O14639 778 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 DAPK3O43293 454 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 NDUFV1P49821 464 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 SLC26A2P50443 739 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 TAS2R40P59535 323 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 MAGOHBQ96A72 148 aaKnown RBP11.18□□□□□ -0.62
VPS11-208ENST00000621676 KCNK16Q96T55 309 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 METTL5Q9NRN9 209 aaKnown RBP11.18□□□□□ -0.62
VPS11-208ENST00000621676 GRIN2DO15399 1336 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 UBE4BO95155 1302 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 SEPT4O43236 478 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 SART1O43290 800 aaKnown RBP11.18□□□□□ -0.62
VPS11-208ENST00000621676 TFE3P19532 575 aaPredicted RBP11.18□□□□□ -0.62
VPS11-208ENST00000621676 PLTPP55058 493 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 DCAF12L1Q5VU92 463 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 SLC27A1Q6PCB7 646 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 DSTYKQ6XUX3 929 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 NT5DC3Q86UY8 548 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 HERPUD2Q9BSE4 406 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 XYLT2Q9H1B5 865 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 ARGLU1Q9NWB6 273 aaPredicted RBP11.18□□□□□ -0.62
VPS11-208ENST00000621676 TSPAN16Q9UKR8 245 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 MTUS1Q9ULD2 1270 aa11.18□□□□□ -0.62
VPS11-208ENST00000621676 ZC3H4Q9UPT8 1303 aaKnown RBP11.18□□□□□ -0.62
VPS11-208ENST00000621676 GTPBP10A4D1E9 387 aaKnown RBP11.17□□□□□ -0.62
VPS11-208ENST00000621676 E5RJQ4 531 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 FAM189A1O60320 539 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 RTN2O75298 545 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 CTNNA2P26232 953 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 OR1G1P47890 313 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 KCNJ6P48051 423 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 DNAJC24Q6P3W2 148 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 GSTA5Q7RTV2 222 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 WDR49Q8IV35 697 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 ABRAQ8N0Z2 381 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 SLC17A8Q8NDX2 589 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 CFAP57Q96MR6 1250 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 ADAMTS10Q9H324 1103 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 KIAA1586Q9HCI6 787 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 PIH1D1Q9NWS0 290 aaKnown RBP11.17□□□□□ -0.62
VPS11-208ENST00000621676 FOXO6A8MYZ6 492 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 ZC3H11AO75152 810 aaKnown RBP eCLIP11.17□□□□□ -0.62
VPS11-208ENST00000621676 DUSP11O75319 330 aaKnown RBP11.17□□□□□ -0.62
VPS11-208ENST00000621676 ZSCAN5DPP0CG00 497 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 ETS1P14921 441 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms