RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 NPAS3Q8IXF0 933 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 MAML2Q8IZL2 1156 aaPredicted RBP16.05■□□□□ 0.16
UBXN1-218ENST00000616865 CSGALNACT2Q8N6G5 542 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 XXYLT1Q8NBI6 393 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 SAAL1Q96ER3 474 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 HINFPQ9BQA5 517 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 CBWD1Q9BRT8 395 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 FAM213AQ9BRX8 229 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 KIAA1586Q9HCI6 787 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 PTPRHQ9HD43 1115 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 HCFC1R1Q9NWW0 138 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 HSPBP1Q9NZL4 362 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 STYXL1Q9Y6J8 313 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 TRIP11Q15643 1979 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 CACNA1AO00555 2505 aa16.05■□□□□ 0.16
UBXN1-218ENST00000616865 GOLGA8IPA6NC78 632 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 GOLGA8JA6NMD2 632 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 CAVIN2O95810 425 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 OR1D2P34982 312 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 FKBP3Q00688 224 aaKnown RBP16.04■□□□□ 0.16
UBXN1-218ENST00000616865 PFKPQ01813 784 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 ADAM9Q13443 819 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 MYBPC2Q14324 1141 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 PABPC1LQ4VXU2 614 aaKnown RBP16.04■□□□□ 0.16
UBXN1-218ENST00000616865 GLRA4Q5JXX5 417 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 RTL10Q7L3V2 364 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 C12orf56Q8IXR9 622 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 GPD1LQ8N335 351 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 RUBCNQ92622 972 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 PPP1R10Q96QC0 940 aaKnown RBP16.04■□□□□ 0.16
UBXN1-218ENST00000616865 KXD1Q9BQD3 176 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 FUCA2Q9BTY2 467 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 BCO2Q9BYV7 579 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 DNMT3BQ9UBC3 853 aaKnown RBP16.04■□□□□ 0.16
UBXN1-218ENST00000616865 CDY1Q9Y6F8 540 aa16.04■□□□□ 0.16
UBXN1-218ENST00000616865 SMTNL1A8MU46 457 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 BECN2A8MW95 431 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 EXTL3O43909 919 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 B3GAT3O94766 335 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 CLTAP09496 248 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 IGFBP6P24592 240 aaPredicted RBP16.03■□□□□ 0.16
UBXN1-218ENST00000616865 TKTP29401 623 aaKnown RBP16.03■□□□□ 0.16
UBXN1-218ENST00000616865 ADSSP30520 456 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 GRM5P41594 1212 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 ACOT2P49753 483 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 ZNF165P49910 485 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 CLCNKBP51801 687 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 PMS1P54277 932 aaKnown RBP16.03■□□□□ 0.16
UBXN1-218ENST00000616865 ZNF445P59923 1031 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 UBXN2BQ14CS0 331 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 NFIL3Q16649 462 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 ZNF528Q3MIS6 628 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 ZCWPW2Q504Y3 356 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 SEZ6Q53EL9 994 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 SLC44A4Q53GD3 710 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 TTI2Q6NXR4 508 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 RSPO2Q6UXX9 243 aaPredicted RBP16.03■□□□□ 0.16
UBXN1-218ENST00000616865 SLC9A9Q8IVB4 645 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 SUMF1Q8NBK3 374 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 RDH13Q8NBN7 331 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 FAM212AQ96EL1 285 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 DDX27Q96GQ7 796 aaKnown RBP16.03■□□□□ 0.16
UBXN1-218ENST00000616865 UROC1Q96N76 676 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 ACAP3Q96P50 834 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 OSBPL6Q9BZF3 934 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 RPF1Q9H9Y2 349 aaKnown RBP16.03■□□□□ 0.16
UBXN1-218ENST00000616865 LTB4R2Q9NPC1 389 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 TOPORSQ9NS56 1045 aaPredicted RBP16.03■□□□□ 0.16
UBXN1-218ENST00000616865 SPATA6Q9NWH7 488 aaPredicted RBP16.03■□□□□ 0.16
UBXN1-218ENST00000616865 FBXO4Q9UKT5 387 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 BACE2Q9Y5Z0 518 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 CACNA1IQ9P0X4 2223 aa16.03■□□□□ 0.16
UBXN1-218ENST00000616865 WDR87Q6ZQQ6 2873 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 ZNF233A6NK53 670 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 ABLIM1O14639 778 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 LAMTOR5O43504 91 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 EPB41P11171 864 aaKnown RBP16.02■□□□□ 0.16
UBXN1-218ENST00000616865 MAGEA9P43362 315 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 TPM4P67936 248 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 MYL5Q02045 173 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 UPP1Q16831 310 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 CCDC40Q4G0X9 1142 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 SPATA1Q5VX52 437 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 FOXR2Q6PJQ5 311 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 CD300LGQ6UXG3 332 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 ANKS3Q6ZW76 656 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 DGLUCYQ7Z3D6 616 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 CREBRFQ8IUR6 639 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 FAM114A1Q8IWE2 563 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 DCLK2Q8N568 766 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 AOPEPQ8N6M6 819 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 C3orf58Q8NDZ4 430 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 ING5Q8WYH8 240 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 CEP63Q96MT8 703 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 SRRTQ9BXP5 876 aaKnown RBP16.02■□□□□ 0.16
UBXN1-218ENST00000616865 HAPLN2Q9GZV7 340 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 GOLGA2P5Q9HBQ8 144 aa16.02■□□□□ 0.16
UBXN1-218ENST00000616865 MAGEC2Q9UBF1 373 aaPredicted RBP16.02■□□□□ 0.16
UBXN1-218ENST00000616865 MRPS23Q9Y3D9 190 aaKnown RBP16.02■□□□□ 0.16
UBXN1-218ENST00000616865 MTF2Q9Y483 593 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms