RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 PCSK1P29120 753 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 LHX1P48742 406 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 TNNC1P63316 161 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 FAM160A1Q05DH4 1040 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 CYP24A1Q07973 514 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 STK4Q13043 487 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 KCNB1Q14721 858 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 NFE2Q16621 373 aaPredicted RBP13.26□□□□□ -0.29
CBWD3-208ENST00000612050 MGAT5BQ3V5L5 792 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 SLC39A12Q504Y0 691 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 DPH6Q7L8W6 267 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 BMP8AQ7Z5Y6 402 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 SPPL2BQ8TCT7 592 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 HPDLQ96IR7 371 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 CHAMP1Q96JM3 812 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 GCNAQ96QF7 691 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 CGRRF1Q99675 332 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 KCNK12Q9HB15 430 aa13.26□□□□□ -0.29
CBWD3-208ENST00000612050 SPTLC1O15269 473 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 KRT13P13646 458 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 HOXD13P35453 343 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 DPYDQ12882 1025 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 DUSP4Q13115 394 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 BIRC3Q13489 604 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 STIM1Q13586 685 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 WSCD1Q658N2 575 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 SLC9A9Q8IVB4 645 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 ADGRF2Q8IZF7 708 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 TOP6BLQ8N6T0 577 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 KIAA0895Q8NCT3 520 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 FGF13Q92913 245 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 SYAP1Q96A49 352 aaPredicted RBP13.25□□□□□ -0.29
CBWD3-208ENST00000612050 MYADMQ96S97 322 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 MMS19Q96T76 1030 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 SEPT5Q99719 369 aaPredicted RBP13.25□□□□□ -0.29
CBWD3-208ENST00000612050 PRRX2Q99811 253 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 TSG101Q99816 390 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 GPR88Q9GZN0 384 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 DNAI2Q9GZS0 605 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 AVENQ9NQS1 362 aaPredicted RBP13.25□□□□□ -0.29
CBWD3-208ENST00000612050 GDAP2Q9NXN4 497 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 DDX43Q9NXZ2 648 aaKnown RBP13.25□□□□□ -0.29
CBWD3-208ENST00000612050 GDE1Q9NZC3 331 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 DNMT3BQ9UBC3 853 aaKnown RBP13.25□□□□□ -0.29
CBWD3-208ENST00000612050 DUSP12Q9UNI6 340 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 YIPF1Q9Y548 306 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 PCDHB5Q9Y5E4 795 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 SCN1AP35498 2009 aa13.25□□□□□ -0.29
CBWD3-208ENST00000612050 MTMR11A4FU01 709 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 MICAL2O94851 1124 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 SEC24AO95486 1093 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 NR3C1P04150 777 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 OR4Q2P0C623 313 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 MYL4P12829 197 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 P4HA1P13674 534 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 ATICP31939 592 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 NTHL1P78549 312 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 MAPRE1Q15691 268 aaKnown RBP13.24□□□□□ -0.29
CBWD3-208ENST00000612050 LMBRD2Q68DH5 695 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-208ENST00000612050 TRAPPC11Q7Z392 1133 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 GUF1Q8N442 669 aaKnown RBP13.24□□□□□ -0.29
CBWD3-208ENST00000612050 CCDC150Q8NCX0 1101 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 ZSWIM2Q8NEG5 633 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 TIGD1Q96MW7 591 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 GSDMAQ96QA5 445 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 ACBD6Q9BR61 282 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 IMPG2Q9BZV3 1241 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 ZCWPW1Q9H0M4 648 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 GOLPH3LQ9H4A5 285 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 SLITRK6Q9H5Y7 841 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 HCFC1R1Q9NWW0 138 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 TSC2P49815 1807 aa13.24□□□□□ -0.29
CBWD3-208ENST00000612050 STK25O00506 426 aa13.23□□□□□ -0.29
CBWD3-208ENST00000612050 PRR29P0C7W0 189 aa13.23□□□□□ -0.29
CBWD3-208ENST00000612050 SRFP11831 508 aa13.23□□□□□ -0.29
CBWD3-208ENST00000612050 PPP1R2P41236 205 aa13.23□□□□□ -0.29
CBWD3-208ENST00000612050 ARHGAP15Q53QZ3 475 aa13.23□□□□□ -0.29
CBWD3-208ENST00000612050 CENPPQ6IPU0 288 aa13.23□□□□□ -0.29
CBWD3-208ENST00000612050 C4orf50Q6ZRC1 276 aa13.23□□□□□ -0.29
CBWD3-208ENST00000612050 PDCL2Q8N4E4 241 aa13.23□□□□□ -0.29
CBWD3-208ENST00000612050 FBXL6Q8N531 539 aa13.23□□□□□ -0.29
CBWD3-208ENST00000612050 KCNH6Q9H252 994 aa13.23□□□□□ -0.29
CBWD3-208ENST00000612050 SNX25Q9H3E2 840 aa13.23□□□□□ -0.29
CBWD3-208ENST00000612050 ABI2Q9NYB9 513 aaPredicted RBP13.23□□□□□ -0.29
CBWD3-208ENST00000612050 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
CBWD3-208ENST00000612050 TRAF3IP3Q9Y228 551 aa13.23□□□□□ -0.29
CBWD3-208ENST00000612050 BDP1A6H8Y1 2624 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 NR2F2P24468 414 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 RPL10AP62906 217 aaKnown RBP13.22□□□□□ -0.29
CBWD3-208ENST00000612050 PFKPQ01813 784 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 HFE2Q6ZVN8 426 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 INTS8Q75QN2 995 aaKnown RBP13.22□□□□□ -0.29
CBWD3-208ENST00000612050 SPATA2LQ8IUW3 424 aaPredicted RBP13.22□□□□□ -0.29
CBWD3-208ENST00000612050 FMR1NBQ8N0W7 255 aaPredicted RBP13.22□□□□□ -0.29
CBWD3-208ENST00000612050 TMEM130Q8N3G9 435 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 ATAD1Q8NBU5 361 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 SPDYE1Q8NFV5 336 aaPredicted RBP13.22□□□□□ -0.29
CBWD3-208ENST00000612050 OR5B17Q8NGF7 314 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms