RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 ZACNQ401N2 412 aa11.13□□□□□ -0.63
LINC01954-201ENST00000607419 FKBP15Q5T1M5 1219 aa11.13□□□□□ -0.63
LINC01954-201ENST00000607419 LMBRD2Q68DH5 695 aaPredicted RBP11.13□□□□□ -0.63
LINC01954-201ENST00000607419 SARM1Q6SZW1 724 aa11.13□□□□□ -0.63
LINC01954-201ENST00000607419 C15orf39Q6ZRI6 1047 aa11.13□□□□□ -0.63
LINC01954-201ENST00000607419 TRAPPC11Q7Z392 1133 aa11.13□□□□□ -0.63
LINC01954-201ENST00000607419 DGLUCYQ7Z3D6 616 aa11.13□□□□□ -0.63
LINC01954-201ENST00000607419 COLGALT1Q8NBJ5 622 aa11.13□□□□□ -0.63
LINC01954-201ENST00000607419 OR5B17Q8NGF7 314 aa11.13□□□□□ -0.63
LINC01954-201ENST00000607419 FAM193BQ96PV7 902 aaPredicted RBP11.13□□□□□ -0.63
LINC01954-201ENST00000607419 MTMR12Q9C0I1 747 aa11.13□□□□□ -0.63
LINC01954-201ENST00000607419 MMRN2Q9H8L6 949 aa11.13□□□□□ -0.63
LINC01954-201ENST00000607419 RTN4Q9NQC3 1192 aaKnown RBP11.13□□□□□ -0.63
LINC01954-201ENST00000607419 DPP3Q9NY33 737 aa11.13□□□□□ -0.63
LINC01954-201ENST00000607419 ITGA11Q9UKX5 1188 aa11.13□□□□□ -0.63
LINC01954-201ENST00000607419 R3HCC1Q9Y3T6 440 aaKnown RBP11.13□□□□□ -0.63
LINC01954-201ENST00000607419 CACNA1IQ9P0X4 2223 aa11.13□□□□□ -0.63
LINC01954-201ENST00000607419 COL4A3Q01955 1670 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 A0A1B0GTH6 734 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 TBKBP1A7MCY6 615 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 PHACTR2O75167 634 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 TPM3P06753 285 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 LRPAP1P30533 357 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 RPL9P32969 192 aaKnown RBP11.12□□□□□ -0.63
LINC01954-201ENST00000607419 AFF1P51825 1210 aaKnown RBP11.12□□□□□ -0.63
LINC01954-201ENST00000607419 PLCB2Q00722 1185 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 MYL7Q01449 175 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 UBE3AQ05086 875 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 RNASELQ05823 741 aaKnown RBP11.12□□□□□ -0.63
LINC01954-201ENST00000607419 TUSC3Q13454 348 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 CBWD6Q4V339 395 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 CBWD3Q5JTY5 395 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 CBWD5Q5RIA9 395 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 LRRC43Q8N309 656 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 FLCNQ8NFG4 579 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 C18orf25Q96B23 403 aaPredicted RBP11.12□□□□□ -0.63
LINC01954-201ENST00000607419 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
LINC01954-201ENST00000607419 UROC1Q96N76 676 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 CDCA3Q99618 268 aaPredicted RBP11.12□□□□□ -0.63
LINC01954-201ENST00000607419 GRPEL1Q9HAV7 217 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 TBC1D13Q9NVG8 400 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 IFNKQ9P0W0 207 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 TUBGCP4Q9UGJ1 667 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 COQ4Q9Y3A0 265 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 R4GN57 208 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 TSC2P49815 1807 aa11.12□□□□□ -0.63
LINC01954-201ENST00000607419 CARNS1A5YM72 827 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 ITGB3P05106 788 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 AOC1P19801 751 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 RBP5P82980 135 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 UBXN1Q04323 297 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 SOX4Q06945 474 aaPredicted RBP11.11□□□□□ -0.63
LINC01954-201ENST00000607419 DSC1Q08554 894 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 TRPC3Q13507 836 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 NR1I3Q14994 352 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 SPOUT1Q5T280 376 aaKnown RBP11.11□□□□□ -0.63
LINC01954-201ENST00000607419 TDRD10Q5VZ19 366 aaKnown RBP11.11□□□□□ -0.63
LINC01954-201ENST00000607419 GBP6Q6ZN66 633 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 CCDC105Q8IYK2 499 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 C1orf127Q8N9H9 656 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 FBXL13Q8NEE6 735 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 NAP1L5Q96NT1 182 aaPredicted RBP11.11□□□□□ -0.63
LINC01954-201ENST00000607419 TCF25Q9BQ70 676 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 TMEM175Q9BSA9 504 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 TRIM5Q9C035 493 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 XPO4Q9C0E2 1151 aaKnown RBP11.11□□□□□ -0.63
LINC01954-201ENST00000607419 ADAM7Q9H2U9 754 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 RAB20Q9NX57 234 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 PCDHB12Q9Y5F1 795 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 HCFC2Q9Y5Z7 792 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 DOCK8Q8NF50 2099 aa11.11□□□□□ -0.63
LINC01954-201ENST00000607419 A0A1W2PQC6 194 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 ANO9A1A5B4 782 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 PIRO00625 290 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 TEX33O43247 280 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 DDHD2O94830 711 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 VNN1O95497 513 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 STAU1O95793 577 aaKnown RBP11.1□□□□□ -0.63
LINC01954-201ENST00000607419 CST3P01034 146 aaPredicted RBP11.1□□□□□ -0.63
LINC01954-201ENST00000607419 HLA-DRAP01903 254 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 ALDH2P05091 517 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 KRT19P08727 400 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 PAX3P23760 479 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 POLR2BP30876 1174 aaKnown RBP11.1□□□□□ -0.63
LINC01954-201ENST00000607419 ATICP31939 592 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 PNPLA4P41247 253 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 PIK3CAP42336 1068 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 GUCY2FP51841 1108 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 NCOA4Q13772 614 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 EXOC3L4Q17RC7 722 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 SGSM1Q2NKQ1 1148 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 C9orf57Q5W0N0 161 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 ZNF280BQ86YH2 543 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 COLGALT2Q8IYK4 626 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 LRRC52Q8N7C0 313 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 DTWD2Q8NBA8 298 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 CCDC150Q8NCX0 1101 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 EHBP1Q8NDI1 1231 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 CXorf38Q8TB03 319 aa11.1□□□□□ -0.63
LINC01954-201ENST00000607419 TAS1R2Q8TE23 839 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms