RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 RIC8AQ9NPQ8 531 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 ATP13A2Q9NQ11 1180 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 WDR70Q9NW82 654 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 TRPM5Q9NZQ8 1165 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 KLHL14Q9P2G3 628 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 EPS15L1Q9UBC2 864 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 ZBTB21Q9ULJ3 1066 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 ARHGAP26Q9UNA1 814 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 HYOU1Q9Y4L1 999 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 MAFBQ9Y5Q3 323 aaPredicted RBP9.3□□□□□ -0.92
COMMD3-215ENST00000602574 MAD1L1Q9Y6D9 718 aa9.3□□□□□ -0.92
COMMD3-215ENST00000602574 TYW5A2RUC4 315 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 SMIM23A6NLE4 172 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 A8MX80 341 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 SNPHO15079 494 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 CCDC22O60826 627 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 SRGAP2O75044 1071 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 TBX10O75333 385 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 UQCRBP14927 111 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 CDH2P19022 906 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 MARCKSP29966 332 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 IL13P35225 146 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 SLC9A3P48764 834 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 CARSP49589 748 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 NEK3P51956 506 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 YARSP54577 528 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 ERVK-24P63145 666 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 CDR2Q01850 454 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 OCA2Q04671 838 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 SCRN3Q0VDG4 424 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 COASYQ13057 564 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 STK3Q13188 491 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 NFIL3Q16649 462 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 FUT11Q495W5 492 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 KHDC1Q4VXA5 237 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 ALFQ53S48 1182 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 DCAF6Q58WW2 860 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 BEND3Q5T5X7 828 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 GTF2IRD2BQ6EKJ0 949 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 CEP68Q76N32 757 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 GTF2IRD2Q86UP8 949 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 LINC00518Q8N0U6 118 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 ZNF486Q96H40 463 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 BTBD9Q96Q07 612 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 GMLQ99445 158 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 NUDT12Q9BQG2 462 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 FERMT1Q9BQL6 677 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 STMN4Q9H169 189 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 ISCUQ9H1K1 167 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 ZNF696Q9H7X3 374 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 AVENQ9NQS1 362 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 INTS9Q9NV88 658 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 GPRC5DQ9NZD1 345 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 REV1Q9UBZ9 1251 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 RSL24D1Q9UHA3 163 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 CDH7Q9ULB5 785 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 CLEC11AQ9Y240 323 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 GPSM3Q9Y4H4 160 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 STON1Q9Y6Q2 735 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 CARMIL3Q8ND23 1372 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 LRRC37A3O60309 1634 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 MYH6P13533 1939 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 C3P01024 1663 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 CEP170BQ9Y4F5 1589 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 GRID2IPA4D2P6 1211 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 PEX1O43933 1283 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 ENTPD5O75356 428 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 NDUFA10O95299 355 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 POP4O95707 220 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 ITGB1P05556 798 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 KRT7P08729 469 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 TFPTP0C1Z6 253 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 RPS2P15880 293 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 DNAJB2P25686 324 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 PCSK6P29122 969 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 NR1H2P55055 460 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 VCPP55072 806 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 RAC1P63000 192 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 ARHGAP4P98171 946 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 MOGSQ13724 837 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 NADK2Q4G0N4 442 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 BRDTQ58F21 947 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 C6orf118Q5T5N4 469 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 IZUMO2Q6UXV1 221 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 NLRP10Q86W26 655 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 RALGPS2Q86X27 583 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 IFNLR1Q8IU57 520 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 CCNYL1Q8N7R7 359 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 TTC13Q8NBP0 860 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 ATAD1Q8NBU5 361 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 FANK1Q8TC84 345 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 SH3RF3Q8TEJ3 882 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 STMN2Q93045 179 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 SLC7A6OSQ96CW6 309 aaPredicted RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 MRRFQ96E11 262 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 SERPINB12Q96P63 405 aa9.29□□□□□ -0.92
COMMD3-215ENST00000602574 USB1Q9BQ65 265 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 PABPC3Q9H361 631 aaKnown RBP9.29□□□□□ -0.92
COMMD3-215ENST00000602574 WDR6Q9NNW5 1121 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms