RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 MRPS35P82673 323 aaKnown RBP18.34■□□□□ 0.53
ARHGEF1-213ENST00000595897 MXRA7P84157 204 aa18.34■□□□□ 0.53
ARHGEF1-213ENST00000595897 ALLCQ8N6M5 410 aa18.34■□□□□ 0.53
ARHGEF1-213ENST00000595897 TMEM121Q9BTD3 319 aa18.34■□□□□ 0.53
ARHGEF1-213ENST00000595897 SLC24A2Q9UI40 661 aa18.34■□□□□ 0.53
ARHGEF1-213ENST00000595897 USP21Q9UK80 565 aa18.34■□□□□ 0.53
ARHGEF1-213ENST00000595897 CLRN2A0PK11 232 aa18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 CFAP69A5D8W1 941 aa18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 GOLGA8RI6L899 631 aa18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 KIF3CO14782 793 aa18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 ALOX15BO15296 676 aa18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 ZWINTO95229 277 aa18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 HLA-DRAP01903 254 aa18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 LMNAP02545 664 aaKnown RBP18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 TCF4P15884 667 aa18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 GEMIN4P57678 1058 aaKnown RBP18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 NOMO3P69849 1222 aa18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 MRPS9P82933 396 aaKnown RBP18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 BSNDQ8WZ55 320 aa18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 ACSF2Q96CM8 615 aaPredicted RBP18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 LBHD1Q9BQE6 289 aaPredicted RBP18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 PARVAQ9NVD7 372 aa18.33■□□□□ 0.53
ARHGEF1-213ENST00000595897 NEFHP12036 1026 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 RPL7AP62424 266 aaKnown RBP18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 ZBTB16Q05516 673 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 MAPK6Q16659 721 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 HIF1AQ16665 826 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 FEZF2Q8TBJ5 459 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 CEP170P1Q96L14 293 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 SLITRK1Q96PX8 696 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 ALG13Q9NP73 1137 aaKnown RBP18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 STOML1Q9UBI4 398 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 IP6K2Q9UHH9 426 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 FEM1BQ9UK73 627 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 WDR64B1ANS9 1081 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 TRAFD1O14545 582 aaPredicted RBP18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 KLC1Q07866 573 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 MTM1Q13496 603 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 PLEKHG4Q58EX7 1191 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 TRIM72Q6ZMU5 477 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 ABRAQ8N0Z2 381 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 SPDYE1Q8NFV5 336 aaPredicted RBP18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 PYROXD1Q8WU10 500 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 ZNF516Q92618 1163 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 KLF6Q99612 283 aaPredicted RBP18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 SAR1AQ9NR31 198 aa18.33■□□□□ 0.52
ARHGEF1-213ENST00000595897 CCDC22O60826 627 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 KHDC1Q4VXA5 237 aaKnown RBP18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 PLEKHA7Q6IQ23 1121 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 NIPA1Q7RTP0 329 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 TAB3Q8N5C8 712 aaPredicted RBP18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 RBBP8NLQ8NC74 664 aaPredicted RBP18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 PPCSQ9HAB8 311 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 UBIAD1Q9Y5Z9 338 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 IVNS1ABPQ9Y6Y0 642 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 ATP9AO75110 1047 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 SMIM24O75264 130 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 SSTR1P30872 391 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 PHBP35232 272 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 TFDP1Q14186 410 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 EFTUD2Q15029 972 aaKnown RBP eCLIP18.32■□□□□ 0.521e-7■■■■■ 37.7
ARHGEF1-213ENST00000595897 GNPTABQ3T906 1256 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 RFWD3Q6PCD5 774 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 NLRX1Q86UT6 975 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 MCUR1Q96AQ8 359 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 C12orf65Q9H3J6 166 aaKnown RBP18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 RBBP6Q7Z6E9 1792 aaKnown RBP18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 LRRC37AA6NMS7 1700 aa18.32■□□□□ 0.52
ARHGEF1-213ENST00000595897 TESPA1A2RU30 521 aaPredicted RBP18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 EME2A4GXA9 379 aaPredicted RBP18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 NVLO15381 856 aaKnown RBP18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 HNRNPCL1O60812 293 aaKnown RBP18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 HAUS5O94927 633 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 ICAM1P05362 532 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 RNASEH2BQ5TBB1 312 aaKnown RBP18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 DCUN1D2Q6PH85 259 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 C4orf50Q6ZRC1 276 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 ANO5Q75V66 913 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 RFWD2Q8NHY2 731 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 TCP10LQ8TDR4 215 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 VCPIP1Q96JH7 1222 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 TRIM55Q9BYV6 548 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 ANKEF1Q9NU02 776 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 HEY2Q9UBP5 337 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 SHOC2Q9UQ13 582 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 GYG2O15488 501 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 ACADSP16219 412 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 JAK3P52333 1124 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 VCPP55072 806 aaKnown RBP18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 MCCD1P59942 119 aaPredicted RBP18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 TMEM154Q6P9G4 183 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 C3orf62Q6ZUJ4 267 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 VPS52Q8N1B4 723 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 ZBTB10Q96DT7 871 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 MIPEPQ99797 713 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 GLIS2Q9BZE0 524 aaPredicted RBP18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 CYLDQ9NQC7 956 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 LNPEPQ9UIQ6 1025 aa18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 RPL26L1Q9UNX3 145 aaKnown RBP18.31■□□□□ 0.52
ARHGEF1-213ENST00000595897 CCNE2O96020 404 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms