RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 TEAD2Q15562 447 aa20.39■□□□□ 0.85
CCDC43-205ENST00000592333 CRELD2Q6UXH1 353 aaPredicted RBP20.39■□□□□ 0.85
CCDC43-205ENST00000592333 SFR1Q86XK3 245 aa20.39■□□□□ 0.85
CCDC43-205ENST00000592333 SUMF1Q8NBK3 374 aa20.39■□□□□ 0.85
CCDC43-205ENST00000592333 ATAD1Q8NBU5 361 aa20.39■□□□□ 0.85
CCDC43-205ENST00000592333 SPPL2BQ8TCT7 592 aa20.39■□□□□ 0.85
CCDC43-205ENST00000592333 DNAJC19Q96DA6 116 aa20.39■□□□□ 0.85
CCDC43-205ENST00000592333 ZNF560Q96MR9 790 aa20.39■□□□□ 0.85
CCDC43-205ENST00000592333 ACCSQ96QU6 501 aa20.39■□□□□ 0.85
CCDC43-205ENST00000592333 CHRDQ9H2X0 955 aa20.39■□□□□ 0.85
CCDC43-205ENST00000592333 CRISPLD1Q9H336 500 aa20.39■□□□□ 0.85
CCDC43-205ENST00000592333 SLITRK6Q9H5Y7 841 aa20.39■□□□□ 0.85
CCDC43-205ENST00000592333 MRPL44Q9H9J2 332 aaKnown RBP20.39■□□□□ 0.85
CCDC43-205ENST00000592333 PRMT8Q9NR22 394 aaPredicted RBP20.39■□□□□ 0.85
CCDC43-205ENST00000592333 EP300Q09472 2414 aaPredicted RBP20.38■□□□□ 0.85
CCDC43-205ENST00000592333 WDR87Q6ZQQ6 2873 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 A0A1W2PRU2 124 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 SOBPA7XYQ1 873 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 HEPACAM2A8MVW5 462 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 ARNTLO00327 626 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 CYB561D2O14569 222 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 LILRB5O75023 590 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 GARTP22102 1010 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 ADSSP30520 456 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 ID4P47928 161 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 NRLP54845 237 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 RESTQ13127 1097 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 VEPH1Q14D04 833 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 SV2CQ496J9 727 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 ARHGAP15Q53QZ3 475 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 L1TD1Q5T7N2 865 aaKnown RBP20.38■□□□□ 0.85
CCDC43-205ENST00000592333 USP49Q70CQ1 688 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 DYMQ7RTS9 669 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 GPR161Q8N6U8 529 aaKnown RBP20.38■□□□□ 0.85
CCDC43-205ENST00000592333 CACTINQ8WUQ7 758 aaKnown RBP20.38■□□□□ 0.85
CCDC43-205ENST00000592333 ATRIPQ8WXE1 791 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 FAM3CQ92520 227 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 C8orf33Q9H7E9 229 aaPredicted RBP20.38■□□□□ 0.85
CCDC43-205ENST00000592333 SLC27A5Q9Y2P5 690 aa20.38■□□□□ 0.85
CCDC43-205ENST00000592333 FRMD3A2A2Y4 597 aa20.37■□□□□ 0.85
CCDC43-205ENST00000592333 KPNA7A9QM74 516 aa20.37■□□□□ 0.85
CCDC43-205ENST00000592333 KIAA0391O15091 583 aaKnown RBP20.37■□□□□ 0.85
CCDC43-205ENST00000592333 CDC25CP30307 473 aa20.37■□□□□ 0.85
CCDC43-205ENST00000592333 VIPR2P41587 438 aa20.37■□□□□ 0.85
CCDC43-205ENST00000592333 CSTF1Q05048 431 aaKnown RBP20.37■□□□□ 0.85
CCDC43-205ENST00000592333 SLC39A14Q15043 492 aa20.37■□□□□ 0.85
CCDC43-205ENST00000592333 YAF2Q8IY57 180 aa20.37■□□□□ 0.85
CCDC43-205ENST00000592333 DCP1BQ8IZD4 617 aaKnown RBP20.37■□□□□ 0.85
CCDC43-205ENST00000592333 OR10T2Q8NGX3 314 aa20.37■□□□□ 0.85
CCDC43-205ENST00000592333 SPATA18Q8TC71 538 aa20.37■□□□□ 0.85
CCDC43-205ENST00000592333 PIAS3Q9Y6X2 628 aa20.37■□□□□ 0.85
CCDC43-205ENST00000592333 ANK1P16157 1881 aa20.37■□□□□ 0.85
CCDC43-205ENST00000592333 COL4A2P08572 1712 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 MYMKA6NI61 221 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 NRG2O14511 850 aaPredicted RBP20.36■□□□□ 0.85
CCDC43-205ENST00000592333 GJA1P17302 382 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 SLC39A12Q504Y0 691 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 ARHGAP29Q52LW3 1261 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 GAREM2Q75VX8 874 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 ARID3BQ8IVW6 561 aaPredicted RBP20.36■□□□□ 0.85
CCDC43-205ENST00000592333 TMEM130Q8N3G9 435 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 CSGALNACT1Q8TDX6 532 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 PYM1Q9BRP8 204 aaKnown RBP20.36■□□□□ 0.85
CCDC43-205ENST00000592333 LRRC27Q9C0I9 530 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 ATXN3LQ9H3M9 355 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 TASP1Q9H6P5 420 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 TMEM206Q9H813 350 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 F5P12259 2224 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 OTOGLQ3ZCN5 2332 aa20.36■□□□□ 0.85
CCDC43-205ENST00000592333 TSC2P49815 1807 aa20.35■□□□□ 0.85
CCDC43-205ENST00000592333 TISP43B9A030 160 aa20.35■□□□□ 0.85
CCDC43-205ENST00000592333 PDIA4P13667 645 aaKnown RBP20.35■□□□□ 0.85
CCDC43-205ENST00000592333 CCR3P51677 355 aa20.35■□□□□ 0.85
CCDC43-205ENST00000592333 PLCB2Q00722 1185 aa20.35■□□□□ 0.85
CCDC43-205ENST00000592333 MTAPQ13126 283 aa20.35■□□□□ 0.85
CCDC43-205ENST00000592333 BRSK2Q8IWQ3 736 aa20.35■□□□□ 0.85
CCDC43-205ENST00000592333 EFCAB13Q8IY85 973 aa20.35■□□□□ 0.85
CCDC43-205ENST00000592333 TMEM86AQ8N2M4 240 aa20.35■□□□□ 0.85
CCDC43-205ENST00000592333 TMEM209Q96SK2 561 aa20.35■□□□□ 0.85
CCDC43-205ENST00000592333 MKNK1Q9BUB5 465 aa20.35■□□□□ 0.85
CCDC43-205ENST00000592333 EPC1Q9H2F5 836 aa20.35■□□□□ 0.85
CCDC43-205ENST00000592333 COL4A3Q01955 1670 aa20.35■□□□□ 0.85
CCDC43-205ENST00000592333 DPYSL4O14531 572 aa20.34■□□□□ 0.85
CCDC43-205ENST00000592333 GCNT3O95395 438 aa20.34■□□□□ 0.85
CCDC43-205ENST00000592333 GABRR2P28476 465 aa20.34■□□□□ 0.85
CCDC43-205ENST00000592333 STAT6P42226 847 aa20.34■□□□□ 0.85
CCDC43-205ENST00000592333 NFE2Q16621 373 aaPredicted RBP20.34■□□□□ 0.85
CCDC43-205ENST00000592333 MGAT5BQ3V5L5 792 aa20.34■□□□□ 0.85
CCDC43-205ENST00000592333 STXBP4Q6ZWJ1 553 aa20.34■□□□□ 0.85
CCDC43-205ENST00000592333 RALGPS2Q86X27 583 aaPredicted RBP20.34■□□□□ 0.85
CCDC43-205ENST00000592333 LRRC52Q8N7C0 313 aa20.34■□□□□ 0.85
CCDC43-205ENST00000592333 LEO1Q8WVC0 666 aaPredicted RBP20.34■□□□□ 0.85
CCDC43-205ENST00000592333 SECISBP2LQ93073 1101 aaKnown RBP20.34■□□□□ 0.85
CCDC43-205ENST00000592333 CLIC6Q96NY7 704 aa20.34■□□□□ 0.85
CCDC43-205ENST00000592333 GCNAQ96QF7 691 aa20.34■□□□□ 0.85
CCDC43-205ENST00000592333 SCN1AP35498 2009 aa20.33■□□□□ 0.85
CCDC43-205ENST00000592333 HAPLN1P10915 354 aaPredicted RBP20.33■□□□□ 0.85
CCDC43-205ENST00000592333 DDX6P26196 483 aaKnown RBP eCLIP20.33■□□□□ 0.85
CCDC43-205ENST00000592333 NASPP49321 788 aaPredicted RBP20.33■□□□□ 0.85
CCDC43-205ENST00000592333 LRRC32Q14392 662 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms