RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 NR2F2P24468 414 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 EIF4A3P38919 411 aaKnown RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 PBX3P40426 434 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 PRCPP42785 496 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 STX17P56962 302 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 HTRA4P83105 476 aaPredicted RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 SMAD3P84022 425 aaKnown RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 SPAG1Q07617 926 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 GRIK3Q13003 919 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 PAK1Q13153 545 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 MORC3Q14149 939 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 NFKBIBQ15653 356 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 STX1AQ16623 288 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 KLHL40Q2TBA0 621 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 DPCR1Q3MIW9 517 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 SASS6Q6UVJ0 657 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 AGMOQ6ZNB7 445 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 SPRED2Q7Z698 418 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 MRPL10Q7Z7H8 261 aaKnown RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 ELOA2Q8IYF1 753 aaPredicted RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 TRIML1Q8N9V2 468 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 ZSWIM2Q8NEG5 633 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 SPATA20Q8TB22 786 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 ZNF507Q8TCN5 953 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 GDPD5Q8WTR4 605 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 NELFBQ8WX92 580 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 EAF1Q96JC9 268 aaPredicted RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 ACAP3Q96P50 834 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 FAM193BQ96PV7 902 aaPredicted RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 TCF12Q99081 682 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 GAS2L1Q99501 681 aaPredicted RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 GTPBP4Q9BZE4 634 aaKnown RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 RPF1Q9H9Y2 349 aaKnown RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 CERS4Q9HA82 394 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 LIN7BQ9HAP6 207 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 RC3H2Q9HBD1 1191 aaKnown RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 PTPRHQ9HD43 1115 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 UBN1Q9NPG3 1134 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 TBC1D13Q9NVG8 400 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 PLA2G2EQ9NZK7 142 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 ZFATQ9P243 1243 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 CACNG4Q9UBN1 327 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 PLAGL2Q9UPG8 496 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 GIT1Q9Y2X7 761 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 PRG3Q9Y2Y8 225 aaPredicted RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 INSL6Q9Y581 213 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 TSC2P49815 1807 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 CDH23Q9H251 3354 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 SYCE3A1L190 88 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 LINC01553A4QN01 128 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 PTGESO14684 152 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 EFSO43281 561 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 TGFB1I1O43294 461 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 EXTL3O43909 919 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 FAM189A1O60320 539 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 ZNF623O75123 536 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 ADRB2P07550 413 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 NFICP08651 508 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 FAM157BP0CG42 384 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 RARAP10276 462 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 DLATP10515 647 aaKnown RBP6.93□□□□□ -1.3
VPS4B-205ENST00000591383 LAG3P18627 525 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 BMP6P22004 513 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 ADSSP30520 456 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 PPP1R2P41236 205 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 AFF1P51825 1210 aaKnown RBP6.93□□□□□ -1.3
VPS4B-205ENST00000591383 FAM189BP81408 668 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 HSP90AA2PQ14568 343 aaPredicted RBP6.93□□□□□ -1.3
VPS4B-205ENST00000591383 BMS1Q14692 1282 aaKnown RBP6.93□□□□□ -1.3
VPS4B-205ENST00000591383 TMEM132DQ14C87 1099 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 SNRNP35Q16560 246 aaKnown RBP6.93□□□□□ -1.3
VPS4B-205ENST00000591383 KYAT1Q16773 422 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 TPD52L1Q16890 204 aaPredicted RBP6.93□□□□□ -1.3
VPS4B-205ENST00000591383 LRIT3Q3SXY7 679 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 EFHC2Q5JST6 749 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 LMBRD2Q68DH5 695 aaPredicted RBP6.93□□□□□ -1.3
VPS4B-205ENST00000591383 SDE2Q6IQ49 451 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 FAM43BQ6ZT52 329 aaPredicted RBP6.93□□□□□ -1.3
VPS4B-205ENST00000591383 CBWD2Q8IUF1 395 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 BRSK2Q8IWQ3 736 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 ADSSL1Q8N142 457 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 GPD1LQ8N335 351 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 XXYLT1Q8NBI6 393 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 COLGALT1Q8NBJ5 622 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 HASPINQ8TF76 798 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 ARNTL2Q8WYA1 636 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 KCNN1Q92952 543 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 P2RX5Q93086 422 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 EEF2KMTQ96G04 330 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 FAM84AQ96KN4 292 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 ZNF558Q96NG5 402 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 CNTNAP3BQ96NU0 1288 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 CASD1Q96PB1 797 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 C17orf80Q9BSJ5 609 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 CNTNAP3Q9BZ76 1288 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 CXCL16Q9H2A7 254 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 KCTD10Q9H3F6 313 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 SLC28A3Q9HAS3 691 aa6.93□□□□□ -1.3
VPS4B-205ENST00000591383 CGNQ9P2M7 1197 aaKnown RBP6.93□□□□□ -1.3
VPS4B-205ENST00000591383 TUBGCP4Q9UGJ1 667 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms